RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 FGF20Q9NP95 211 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF275Q9NSD4 429 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 FAIMQ9NVQ4 179 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 DNAJC27Q9NZQ0 273 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 NUP50Q9UKX7 468 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 MOKQ9UQ07 419 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 UGT2A1Q9Y4X1 527 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 N6AMT1Q9Y5N5 214 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 NCKAP5O14513 1909 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 TNRC6AQ8NDV7 1962 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 APC2O95996 2303 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ACACAQ13085 2346 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 TRGV5A0A0B4J1U4 118 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 PRSS37A4D1T9 235 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 RBMY1BA6NDE4 496 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 RBMY1EA6NEQ0 496 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 FAM183AA6NL82 134 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 CENPBD1B2RD01 187 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 H0YC42 278 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 J3QRE1 110 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 K7EM74 188 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 XKRYO14609 159 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 GOSR2O14653 212 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 TNFSF11O14788 317 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 TRAF3IP2O43734 574 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 SERF1AO75920 110 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 OR2J3O76001 311 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 FADS2O95864 444 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 IGHV3-23P01764 117 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 HTR1AP08908 422 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 GIG44P09565 113 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 RBMY1DP0C7P1 496 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 RBMY1A1P0DJD3 496 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF43P17038 809 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 SPI1P17947 270 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 DCKP27707 260 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 CRABP1P29762 137 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 BLVRAP53004 296 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 TGFBR3Q03167 851 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 KRR1Q13601 381 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 C1DQ13901 141 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 HIST3H3Q16695 136 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 LINC00303Q3SY05 128 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 KLHL12Q53G59 568 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 PRR30Q53SZ7 412 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 THEM4Q5T1C6 240 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 LINC01590Q5TEZ4 76 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 HBMQ6B0K9 141 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 XAF1Q6GPH4 301 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 TFAP2EQ6VUC0 442 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 NCCRP1Q6ZVX7 275 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 AHSA2Q719I0 299 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 BIVMQ86UB2 503 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 GID4Q8IVV7 300 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF100Q8IYN0 542 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 OR6V1Q8N148 313 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 C6orf223Q8N319 242 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ZIC4Q8N9L1 334 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 CYB561A3Q8NBI2 242 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 BBS1Q8NFJ9 593 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 OR2T4Q8NH00 348 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 OR6X1Q8NH79 312 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 OR10D3Q8NH80 312 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 OR2V1Q8NHB1 315 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 CPNE4Q96A23 557 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 SLC25A44Q96H78 314 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 FOXN4Q96NZ1 517 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 RBP7Q96R05 134 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 OR8B4Q96RC9 309 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF649Q9BS31 505 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 CDCA4Q9BXL8 241 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 SELENOIQ9C0D9 397 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 CCDC90BQ9GZT6 254 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 MFFQ9GZY8 342 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 OR51V1Q9H2C8 321 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 GEMIN7Q9H840 131 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF702PQ9H963 129 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 RNF122Q9H9V4 155 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ACOT13Q9NPJ3 140 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 RPRD1BQ9NQG5 326 aaKnown RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 PAQR5Q9NXK6 330 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 PTTG3PQ9NZH4 202 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 KCNIP1Q9NZI2 227 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF107Q9UII5 783 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 KIF25Q9UIL4 384 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 CACNA1AO00555 2505 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 DCHS1Q96JQ0 3298 aa2.96□□□□□ -1.94
PTCD3-216ENST00000487043 ANKRD11Q6UB99 2663 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-216ENST00000487043 IGHV3OR16-13A0A075B7E8 117 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 IGLV1-36A0A0B4J1U3 117 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 IGHV3-15A0A0B4J1V0 119 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 A0A1B0GVG6 124 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 CCDC160A6NGH7 325 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF726A6NNF4 738 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF99A8MXY4 864 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF701M0R085 212 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-216ENST00000487043 GPR171O14626 319 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 BCL2L11O43521 198 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 SLC16A7O60669 478 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 CTAG2O75638 210 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms