RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 LOC390937A0A1W2PQ73 354 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 WNT9BO14905 357 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 HBE1P02100 147 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 SLC25A4P12235 298 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 GNPNAT1Q96EK6 184 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 S1PR3Q99500 378 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 GLRX2Q9NS18 164 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 FAM90A27PA6NNH2 459 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 CDX4O14627 284 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 MBPP02686 304 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 HLA-DRB3P79483 266 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 TNFAIP6P98066 277 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 FOXO1Q12778 655 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 LY6G6FQ5SQ64 297 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 SLC2A8Q9NY64 477 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 STRAPQ9Y3F4 350 aaKnown RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 OTOGLQ3ZCN5 2332 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 NKX6-3A6NJ46 265 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 TRIM77I1YAP6 450 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 DAOP14920 347 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 RPS2P15880 293 aaKnown RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 CCL8P80075 99 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 ADIRFQ15847 76 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 KLF14Q8TD94 323 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 MTCH1Q9NZJ7 389 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 OR1A1Q9P1Q5 309 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 TRAV14DV4A0A0A6YYC5 116 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 IGKV1-12A0A0C4DH73 117 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 IGKV1D-12P01611 117 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 OR8U8P0C7N1 319 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 FGF8P55075 233 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 RUNX1Q01196 453 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 NHLRC3Q5JS37 347 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 ABLIM2Q6H8Q1 611 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 OR52L2PQ8NGH6 319 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 PHYHIPLQ96FC7 376 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 RTBDNQ9BSG5 229 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-216ENST00000486741 PROK2Q9HC23 129 aa11.35□□□□□ -0.59
HMGN1-216ENST00000486741 NCOA6Q14686 2063 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-216ENST00000486741 ST8SIA5O15466 376 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 S100A8P05109 93 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 NQO2P16083 231 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 RPP30P78346 268 aaKnown RBP11.34□□□□□ -0.59
HMGN1-216ENST00000486741 KIAA0141Q14154 515 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-216ENST00000486741 CBLN2Q8IUK8 224 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 EDARADDQ8WWZ3 215 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 FRZBQ92765 325 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
HMGN1-216ENST00000486741 ABHD14BQ96IU4 210 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 SCAF4O95104 1147 aaKnown RBP11.34□□□□□ -0.59
HMGN1-216ENST00000486741 TFF1P04155 84 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 HGFACQ04756 655 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 ADAMTS17Q8TE56 1095 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 SMCO4Q9NRQ5 59 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 KPTNQ9Y664 436 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 SHOXO15266 292 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 G6PCP35575 357 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 HSD17B13Q7Z5P4 300 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-216ENST00000486741 RCC2Q9P258 522 aaKnown RBP11.34□□□□□ -0.59
HMGN1-216ENST00000486741 LPAR3Q9UBY5 353 aa11.34□□□□□ -0.59
HMGN1-216ENST00000486741 GTF3C1Q12789 2109 aa11.33□□□□□ -0.59
HMGN1-216ENST00000486741 IGKV1-27A0A075B6S5 117 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 CD82P27701 267 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 RAB13P51153 203 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 EWSR1Q01844 656 aaKnown RBP eCLIP11.33□□□□□ -0.6
HMGN1-216ENST00000486741 IL13RA2Q14627 380 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 NSUN5P2Q63ZY6 315 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 ZNF787Q6DD87 383 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
HMGN1-216ENST00000486741 MMP26Q9NRE1 261 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 NDRG3Q9UGV2 375 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 HSF4Q9ULV5 492 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 OSGIN2Q9Y236 505 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 TMEM218A2RU14 115 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 CRYM-AS1A6NIL9 109 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 TMPRSS2O15393 492 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 KITLGP21583 273 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 MOB1BQ7L9L4 216 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 OR1L1Q8NH94 360 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 TP53RKQ96S44 253 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 ZGRF1Q86YA3 2104 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 SPG11Q96JI7 2443 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 TRGV10A0A0A0MS01 117 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 LDLRAD4O15165 306 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 B3GALT5-AS1P59052 145 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 ZNF345Q14585 488 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 ZNF818PQ6ZRF7 136 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 ARV1Q9H2C2 271 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 RNF122Q9H9V4 155 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 UQCC1Q9NVA1 299 aa11.33□□□□□ -0.6
HMGN1-216ENST00000486741 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 PRR33A8MZF0 331 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 AQP7O14520 342 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 NTF4P34130 210 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 CSRP2Q16527 193 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 HIST2H3PS2Q5TEC6 136 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 OR10X1Q8NGY0 326 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 PINX1Q96BK5 328 aaKnown RBP11.32□□□□□ -0.6
HMGN1-216ENST00000486741 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 WBP1Q96G27 269 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms