RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 RPP30P78346 268 aaKnown RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 SERF2P84101 59 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 MALLQ13021 153 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 LRRC75BQ2VPJ9 315 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 TPTE2P1Q5T6R2 138 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 FAM78BQ5VT40 261 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 ASCL4Q6XD76 172 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 RPP25LQ8N5L8 163 aaKnown RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 GJC3Q8NFK1 279 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 RNASE8Q8TDE3 154 aaKnown RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 SPSB1Q96BD6 273 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 GPR146Q96CH1 333 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 ZNF442Q9H7R0 627 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 CCL28Q9NRJ3 127 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 PXMP4Q9Y6I8 212 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 TMEM250H0YL14 139 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 M0R135 149 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 PDCD6O75340 191 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 PDGFBP01127 241 aaPredicted RBP9.12□□□□□ -0.95
CCDC171-208ENST00000486641 POU2F2P09086 479 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 FOXL2P58012 376 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 RBX1P62877 108 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 COTL1Q14019 142 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 OR8B8Q15620 311 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 COL5A1-AS1Q5SY13 56 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 KCNIP4Q6PIL6 250 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 HAPLN4Q86UW8 402 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 BATF2Q8N1L9 274 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 OR4F5Q8NH21 305 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 ZNF799Q96GE5 643 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 MRGPRX4Q96LA9 322 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 OR4F4Q96R69 305 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 GABRG3Q99928 467 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 MSL2Q9HCI7 577 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 OBP2AQ9NY56 170 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 PPIAL4AQ9Y536 164 aa9.12□□□□□ -0.95
CCDC171-208ENST00000486641 IGHV3-20A0A0C4DH32 117 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 LNP1A1A4G5 178 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 SLC22A20A6NK97 555 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 SCTP09683 121 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 IAPPP10997 89 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 TNFRSF4P43489 277 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 PSMB3P49720 205 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 LCN2P80188 198 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 RNPS1Q15287 305 aaKnown RBP9.11□□□□□ -0.95
CCDC171-208ENST00000486641 PHYHD1Q5SRE7 291 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 OR5D13Q8NGL4 314 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 BORCS8Q96FH0 119 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 WDYHV1Q96HA8 205 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 OXGR1Q96P68 337 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 RAB40CQ96S21 281 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 AURKAIP1Q9NWT8 199 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-208ENST00000486641 REV3LO60673 3130 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 PCDH15Q96QU1 1955 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 YLPM1P49750 1951 aaKnown RBP9.11□□□□□ -0.95
CCDC171-208ENST00000486641 MSR1P21757 451 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 CHRNB4P30926 498 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 OTX1P32242 354 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-208ENST00000486641 CDKN1AP38936 164 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 SAPCD1Q5SSQ6 148 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 Q6ZRM9 215 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 MYPOPQ86VE0 399 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-208ENST00000486641 CMTM2Q8TAZ6 248 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 PINX1Q96BK5 328 aaKnown RBP9.11□□□□□ -0.95
CCDC171-208ENST00000486641 WDR61Q9GZS3 305 aaKnown RBP9.11□□□□□ -0.95
CCDC171-208ENST00000486641 PCED1AQ9H1Q7 454 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 FOXJ2Q9P0K8 574 aa9.11□□□□□ -0.95
CCDC171-208ENST00000486641 GRIFINA4D1Z8 144 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 PGLYRP1O75594 196 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 PIAS2O75928 621 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 ADMP35318 185 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 GUCA1AP43080 201 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 CAPZBP47756 277 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 MNX1P50219 401 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 UBE2NP61088 152 aaKnown RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 DAZAP2Q15038 168 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 TMEM183BQ1AE95 376 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 TCF23Q7RTU1 214 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 VN1R17PQ8TDU5 208 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 MRGPRX1Q96LB2 322 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 OR4C12Q96R67 309 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 PSENENQ9NZ42 101 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 TP53TG3Q9ULZ0 132 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 OR7C1O76099 320 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 SUMO3P55854 103 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 SOX8P57073 446 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 CNN3Q15417 329 aaKnown RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 MMDQ15546 238 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 SHISA6Q6ZSJ9 500 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 AGBL5Q8NDL9 886 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 ADPRHL1Q8NDY3 354 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 OR51B6Q9H340 312 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 UBE2ZQ9H832 354 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-208ENST00000486641 PLEK2Q9NYT0 353 aa9.1□□□□□ -0.95
CCDC171-208ENST00000486641 MED12Q93074 2177 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 A0A1W2PR80 420 aa9.09□□□□□ -0.95
CCDC171-208ENST00000486641 C1QTNF9BB2RNN3 333 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms