RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	FAM90A24P	P0C7X0	464 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	SLC2A1	P11166	492 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	TUBG1	P23258	451 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	CPT2	P23786	658 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	HRH1	P35367	487 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	NUP62	P37198	522 aa	Predicted RBP	6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	SLC6A9	P48067	706 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	RBP2	P50120	134 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	EFNA4	P52798	201 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	MTCP1	P56278	107 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	DSCR9	P59020	149 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	TAS2R46	P59540	309 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	IL13RA1	P78552	427 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	FAM3A	P98173	230 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	HGFAC	Q04756	655 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	CNN3	Q15417	329 aa	Known RBP	6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	ELP2	Q6IA86	826 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	ZNF774	Q6NX45	483 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	UQCC3	Q6UW78	93 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	ALKAL2	Q6UX46	152 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	LHFPL2	Q6ZUX7	228 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	TMED4	Q7Z7H5	227 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	MYPOP	Q86VE0	399 aa	Predicted RBP	6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	COMMD2	Q86X83	199 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	ZNF525	Q8N782	197 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	TMEM104	Q8NE00	496 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	SLC30A7	Q8NEW0	376 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	OR4S1	Q8NGB4	309 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	OR4K15	Q8NH41	348 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	LHFPL5	Q8TAF8	219 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	PPP1R1C	Q8WVI7	109 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	NUDCD2	Q8WVJ2	157 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	GTF3A	Q92664	365 aa	Known RBP	6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	TMEM230	Q96A57	120 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	REEP6	Q96HR9	211 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	CXorf58	Q96LI9	332 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	S100A13	Q99584	98 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	METTL9	Q9H1A3	318 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	IFT46	Q9NQC8	304 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	TUBG2	Q9NRH3	451 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	TMEM100	Q9NV29	134 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	DNAJB11	Q9UBS4	358 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	NOP16	Q9Y3C1	178 aa	Known RBP	6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	PRR14L	Q5THK1	2151 aa		6.07	□□□□□ -1.44
PUDP-204	ENST00000486446	IGHV4-30-2	A0A087WSY4	118 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	IGHV2OR16-5	A0A0B4J2B6	119 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	ZNF816-ZNF321P	A0A0X1KG74	233 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	hCG_38984	A0A1B0GV85	526 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	KANTR	A0A1W2PQU2	76 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	RAB19	A4D1S5	217 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	INAFM1	C9JVW0	142 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	SOCS1	O15524	211 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	LY6H	O94772	140 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	RLN2	P04090	185 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	LCAT	P04180	440 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	IFNA6	P05013	189 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	PATE4	P0C8F1	98 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	PF4V1	P10720	104 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	GNB3	P16520	340 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	PSMB6	P28072	239 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	OR3A4P	P47883	348 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	ATP1B3	P54709	279 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	RAB1A	P62820	205 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	ADIPOQ	Q15848	244 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	MICB	Q29980	383 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	MST1L	Q2TV78	715 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	SNAI3	Q3KNW1	292 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	SCGB2B2	Q4G0G5	96 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	SMUG1	Q53HV7	270 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	PAN3	Q58A45	887 aa	Known RBP	6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	PABPC1L2A	Q5JQF8	200 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	DHRS11	Q6UWP2	260 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	TMEM17	Q86X19	198 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	GVQW1	Q8N7I0	195 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	CHST4	Q8NCG5	386 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	CPEB3	Q8NE35	698 aa	Known RBP	6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	CSNK2A3	Q8NEV1	391 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	NUP37	Q8NFH4	326 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	THAP6	Q8TBB0	222 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	FAM216A	Q8WUB2	273 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	EMG1	Q92979	244 aa	Known RBP	6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	APOBEC3D	Q96AK3	386 aa	Predicted RBP	6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	CMBL	Q96DG6	245 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	LINC00052	Q96N35	136 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	GPER1	Q99527	375 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	NICN1	Q9BSH3	213 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	SOX7	Q9BT81	388 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	WDR13	Q9H1Z4	485 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	C5orf66	Q9H5L9	145 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	ZNF442	Q9H7R0	627 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	ZMAT3	Q9HA38	289 aa	Known RBP	6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	DYNLRB1	Q9NP97	96 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	YAE1D1	Q9NRH1	226 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	SLC7A11	Q9UPY5	501 aa		6.06	□□□□□ -1.44
PUDP-204	ENST00000486446	C5orf63	A6NC05	138 aa		6.05	□□□□□ -1.44
PUDP-204	ENST00000486446	MPTX1	A8MV57	137 aa		6.05	□□□□□ -1.44
PUDP-204	ENST00000486446	CRTAP	O75718	401 aa	Predicted RBP	6.05	□□□□□ -1.44
PUDP-204	ENST00000486446	MPIG6B	O95866	241 aa		6.05	□□□□□ -1.44
PUDP-204	ENST00000486446	GLA	P06280	429 aa		6.05	□□□□□ -1.44
PUDP-204	ENST00000486446	TMEM225B	P0DP42	221 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms