RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 MT-ND4P03905 459 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 LPLP06858 475 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 UCHL1P09936 223 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 IGHV3-43DP0DP04 118 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 TMEM11P17152 192 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 SRMP19623 302 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 HTR2CP28335 458 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 VHLP40337 213 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 BLCAPP62952 87 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 ABCA11PQ4W5N1 156 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 C9orf152Q5JTZ5 239 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 SYT6Q5T7P8 510 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-208ENST00000486404 ZNF367Q7RTV3 350 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 LRRTM1Q86UE6 522 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 OR8H3Q8N146 312 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 DRAM1Q8N682 238 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 OR52M1Q8NGK5 317 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 OR6M1Q8NGM8 313 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 RBM14Q96PK6 669 aaKnown RBP10.32□□□□□ -0.76
CHMP3-208ENST00000486404 Q9H521 79 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 ISYNA1Q9NPH2 558 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 SERTAD4Q9NUC0 356 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 KCNIP1Q9NZI2 227 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 RAB26Q9ULW5 256 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 A0A1W2PPI3 338 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 C12orf77C9JDV5 145 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 C15orf65H3BRN8 121 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 CCRL2O00421 344 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 BPNT1O95861 308 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 GLAP06280 429 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 SNRNP70P08621 437 aaKnown RBP10.31□□□□□ -0.76
CHMP3-208ENST00000486404 MAP2K4P45985 399 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 TPBGQ13641 420 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 TBCEQ15813 527 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-208ENST00000486404 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 UNQ9370/PRO34162Q6UXP9 181 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 LYPD6Q86Y78 171 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 OR10V1Q8NGI7 309 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 KCNG3Q8TAE7 436 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 CFHR4Q92496 578 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 MGLLQ99685 303 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 CHMP1AQ9HD42 196 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-208ENST00000486404 GFOD1Q9NXC2 390 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 VWFP04275 2813 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 MEGF8Q7Z7M0 2845 aa10.31□□□□□ -0.76
CHMP3-208ENST00000486404 SC5DO75845 299 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 IGKV1D-33P01593 117 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 IGKV1-33P01594 117 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 HBZP02008 142 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 GAPDHP04406 335 aaKnown RBP10.3□□□□□ -0.76
CHMP3-208ENST00000486404 VSIG8P0DPA2 414 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 CD28P10747 220 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 CPEP16870 476 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 CALRP27797 417 aaKnown RBP10.3□□□□□ -0.76
CHMP3-208ENST00000486404 REG1BP48304 166 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 RPS27AP62979 156 aaKnown RBP10.3□□□□□ -0.76
CHMP3-208ENST00000486404 P2RY14Q15391 338 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 RAB11BQ15907 218 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 C1orf100Q5SVJ3 147 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 HIST2H2BDQ6DRA6 164 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 OR10K2Q6IF99 312 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 MOB3BQ86TA1 216 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 LYG1Q8N1E2 194 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 OR1L1Q8NH94 360 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 URM1Q9BTM9 101 aaKnown RBP10.3□□□□□ -0.76
CHMP3-208ENST00000486404 KCNK15Q9H427 330 aa10.3□□□□□ -0.76
CHMP3-208ENST00000486404 SH2D7A6NKC9 451 aaPredicted RBP10.29□□□□□ -0.76
CHMP3-208ENST00000486404 SLC22A1O15245 554 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 TXNL1O43396 289 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 ARSBP15848 533 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 RCC1P18754 421 aaPredicted RBP10.29□□□□□ -0.76
CHMP3-208ENST00000486404 RANBP1P43487 201 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 GP2P55259 537 aaKnown RBP10.29□□□□□ -0.76
CHMP3-208ENST00000486404 LOXL3P58215 753 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 GABARAPL2P60520 117 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 ZNF816Q0VGE8 651 aaPredicted RBP10.29□□□□□ -0.76
CHMP3-208ENST00000486404 DIAPH2-AS1Q14236 149 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 HNF4GQ14541 408 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 Q3ZCU0 254 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 FBLN7Q53RD9 439 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 KHDC1LQ5JSQ8 128 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 Q6ZS46 218 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 SVOPQ8N4V2 548 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 LINC00311Q8N616 119 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 C8orf31Q8N9H6 132 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 SETD6Q8TBK2 473 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 MRPL30Q8TCC3 161 aaKnown RBP10.29□□□□□ -0.76
CHMP3-208ENST00000486404 OCSTAMPQ9BR26 566 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 TAF9BQ9HBM6 251 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 ACOT13Q9NPJ3 140 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 ABRACLQ9P1F3 81 aa10.29□□□□□ -0.76
CHMP3-208ENST00000486404 IGHV1-3A0A0C4DH29 117 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 SLC17A2O00624 439 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 MYL9P24844 172 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 CHATP28329 748 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 FABP5Q01469 135 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 UNC119Q13432 240 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 SIGIRRQ6IA17 410 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 MOB1BQ7L9L4 216 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 OR2W3Q7Z3T1 314 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms