RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 IGHV3-13P01766 116 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 IGHV3-7P01780 117 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 RCC1P18754 421 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-228ENST00000486227 DLK1P80370 383 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 OR5A2Q8NGI9 324 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 OR5D13Q8NGL4 314 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 ERGIC1Q969X5 290 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 AQP10Q96PS8 301 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 LRFN3Q9BTN0 628 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 FAM206AQ9NX38 181 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 TREM2Q9NZC2 230 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 PITPNC1Q9UKF7 332 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 PSG11Q9UQ72 335 aa9.57□□□□□ -0.88
HDAC6-228ENST00000486227 RALGAPA1Q6GYQ0 2036 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 C3orf85A0A1B0GTC6 90 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 hADV38S2A0JD32 116 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 CLEC18AA5D8T8 446 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 ISG15P05161 165 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 CLEC12BQ2HXU8 276 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 CLEC18CQ8NCF0 446 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 OR5C1Q8NGR4 320 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 SLC35E1Q96K37 410 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 REG4Q9BYZ8 158 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 MSL2Q9HCI7 577 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 GPR27Q9NS67 375 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 LIPGQ9Y5X9 500 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 SPTAN1Q13813 2472 aaKnown RBP9.56□□□□□ -0.88
HDAC6-228ENST00000486227 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 GABRA4P48169 554 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 ADAMTS17Q8TE56 1095 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 RPEQ96AT9 228 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 IMMP1LQ96LU5 166 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 ACTR3CQ9C0K3 210 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-228ENST00000486227 PRSS50Q9UI38 385 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 IGKV1D-43A0A0B4J1Z2 117 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 G3V3Q6 166 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 J3QT63 122 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 GAS1P54826 345 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 TLE1Q04724 770 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-228ENST00000486227 FAM131CQ96AQ9 280 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 SNX22Q96L94 193 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF488Q96MN9 340 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 GAL3ST2Q9H3Q3 398 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 OR5AC2Q9NZP5 309 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 FAM24AA6NFZ4 105 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 RPL29P47914 159 aaKnown RBP9.56□□□□□ -0.88
HDAC6-228ENST00000486227 SSX7Q7RTT5 188 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 FDCSPQ8NFU4 85 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 NOL4LQ96MY1 436 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-228ENST00000486227 LPAR5Q9H1C0 372 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 G6PC2Q9NQR9 355 aa9.56□□□□□ -0.88
HDAC6-228ENST00000486227 C20orf202A1L168 122 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF320A2RRD8 509 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 LYPD3O95274 346 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 UMODP07911 640 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 CDX1P47902 265 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-228ENST00000486227 ERHP84090 104 aaKnown RBP9.55□□□□□ -0.88
HDAC6-228ENST00000486227 C2orf68Q2NKX9 166 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 FBP1P09467 338 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 CTSSP25774 331 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 CCKARP32238 428 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 LPAR6P43657 344 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 TPPP2P59282 170 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 HIST1H3AP68431 136 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 TMEM241Q24JQ0 296 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 SNAI3Q3KNW1 292 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 VAX1Q5SQQ9 334 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 C1orf100Q5SVJ3 147 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 DHRS11Q6UWP2 260 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 C17orf82Q86X59 251 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-228ENST00000486227 HOGA1Q86XE5 327 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 TAAR6Q96RI8 345 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 NPIPB13A6NJU9 1138 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 NPIPB4C9JG80 1138 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 M0QZ24 198 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 CD74P04233 296 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 RIPPLY2Q5TAB7 128 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
HDAC6-228ENST00000486227 SIGLEC12Q96PQ1 595 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 RPH3ALQ9UNE2 315 aa9.55□□□□□ -0.88
HDAC6-228ENST00000486227 NCBP2LA6PVI3 153 aaKnown RBP9.54□□□□□ -0.88
HDAC6-228ENST00000486227 IGHMP01871 453 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 DDTP30046 118 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 CEACAM3P40198 252 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 MDH2P40926 338 aaKnown RBP9.54□□□□□ -0.88
HDAC6-228ENST00000486227 GALR1P47211 349 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF90Q03938 601 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 RTP5Q14D33 572 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 BTNL8Q6UX41 500 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 SIGLECL1Q8N7X8 197 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 LRRC75AQ8NAA5 344 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 OR10A7Q8NGE5 316 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 ADGRG7Q96K78 797 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 PARD6AQ9NPB6 346 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 KIF26BQ2KJY2 2108 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 M0QZK8 103 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 GGCTO75223 188 aaKnown RBP9.54□□□□□ -0.88
HDAC6-228ENST00000486227 PRF1P14222 555 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms