RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PHYHIPQ92561 330 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 TMED9Q9BVK6 235 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 DUSP21Q9H596 190 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 RAB9BQ9NP90 201 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 MOB4Q9Y3A3 225 aa14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 RRP15Q9Y3B9 282 aaKnown RBP14.66□□□□□ -0.06
PRPF40A-209ENST00000486100 SH2D7A6NKC9 451 aaPredicted RBP14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 C12orf77C9JDV5 145 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 SPINT2O43291 252 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 SC5DO75845 299 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 GAPDHP04406 335 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 UBBP0CG47 229 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 SRMP19623 302 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 MYF6P23409 242 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 VHLP40337 213 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 C6orf183Q5T699 404 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 FAM27D1Q5T7N8 215 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 GLT8D1Q68CQ7 371 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 SIGIRRQ6IA17 410 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 CEACAM19Q7Z692 300 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 LRRTM1Q86UE6 522 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 C1QL4Q86Z23 238 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 OR4F17Q8NGA8 305 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 OR4K15Q8NH41 348 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 R3HDM4Q96D70 268 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 OR4F4Q96R69 305 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 CST11Q9H112 138 aa14.65□□□□□ -0.06
PRPF40A-209ENST00000486100 IGHV3-43A0A0B4J1X8 118 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 CCRL2O00421 344 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 HSD17B6O14756 317 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 IGHV3-43DP0DP04 118 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 TMEM11P17152 192 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 HES1Q14469 280 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 TMEM30BQ3MIR4 351 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 C9orf152Q5JTZ5 239 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 C1orf100Q5SVJ3 147 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 FAM53AQ6NSI3 398 aaPredicted RBP14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 TRAT1Q6PIZ9 186 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 FAM46BQ96A09 425 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 ANKRD60Q9BZ19 345 aa14.64□□□□□ -0.07
PRPF40A-209ENST00000486100 IGHV1-3A0A0C4DH29 117 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 UBE2QL1A1L167 161 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 PDCD6O75340 191 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 MPIG6BO95866 241 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 IGKV1D-33P01593 117 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 IGKV1-33P01594 117 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 UCHL1P09936 223 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 CD37P11049 281 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 IL3RAP26951 378 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 EBI3Q14213 229 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 HNF4GQ14541 408 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 HSD17B12Q53GQ0 312 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 RBM48Q5RL73 367 aaKnown RBP14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 LIPKQ5VXJ0 399 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 MOB3BQ86TA1 216 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 UFD1Q92890 307 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 ST6GALNAC6Q969X2 333 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 VCX3BQ9H321 246 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 ISYNA1Q9NPH2 558 aa14.63□□□□□ -0.07
PRPF40A-209ENST00000486100 NOTCH1P46531 2555 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 G3V4G9 280 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 FGF16O43320 207 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 RGS10O43665 173 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 HBZP02008 142 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 VSIG8P0DPA2 414 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 RCC1P18754 421 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 REG1BP48304 166 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 TPBGQ13641 420 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 TCTEX1D4Q5JR98 221 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 C5orf56Q8N8D9 126 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 OR1L1Q8NH94 360 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 MBNL3Q9NUK0 354 aaKnown RBP14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 GNG12Q9UBI6 72 aa14.62□□□□□ -0.07
PRPF40A-209ENST00000486100 TCRBV4S1A1TA0A5B7 111 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 CRHBPP24387 322 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 ZNF134P52741 427 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 SAMD5Q5TGI4 173 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 STEAP3Q658P3 488 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 OR10K2Q6IF99 312 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 SLC25A48Q6ZT89 311 aaKnown RBP14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 ZNF554Q86TJ5 538 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 PRR18Q8N4B5 295 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 ZNF439Q8NDP4 499 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 OR4X2Q8NGF9 303 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 KCNG3Q8TAE7 436 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 RTN4IP1Q8WWV3 396 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 TMEM203Q969S6 136 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 NEDD4LQ96PU5 975 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 TAF9BQ9HBM6 251 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 KCNIP1Q9NZI2 227 aa14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 TSSC4Q9Y5U2 329 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-209ENST00000486100 IGHV3-72A0A0B4J1Y9 119 aa14.6□□□□□ -0.07
PRPF40A-209ENST00000486100 A0A1W2PRX2 142 aa14.6□□□□□ -0.07
PRPF40A-209ENST00000486100 SLC22A1O15245 554 aa14.6□□□□□ -0.07
PRPF40A-209ENST00000486100 SLC31A2O15432 143 aa14.6□□□□□ -0.07
PRPF40A-209ENST00000486100 HSMCR30P0CW71 290 aa14.6□□□□□ -0.07
PRPF40A-209ENST00000486100 HTR2CP28335 458 aa14.6□□□□□ -0.07
PRPF40A-209ENST00000486100 CD1BP29016 333 aa14.6□□□□□ -0.07
PRPF40A-209ENST00000486100 RPS27AP62979 156 aaKnown RBP14.6□□□□□ -0.07
PRPF40A-209ENST00000486100 TRAM1Q15629 374 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms