RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CRHBPP24387 322 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 C16orf82Q7Z2V1 217 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 C5orf24Q7Z6I8 188 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 OR1L1Q8NH94 360 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 Q96M66 194 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 CITED2Q99967 270 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-204ENST00000486023 GFOD1Q9NXC2 390 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 GHRLQ9UBU3 117 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 WNK1Q9H4A3 2382 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 ORC5O43913 435 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 TMEM11P17152 192 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 HTR2CP28335 458 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 RAB7AP51149 207 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 P2RY14Q15391 338 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 C6orf183Q5T699 404 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 SIGIRRQ6IA17 410 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 SLC16A12Q6ZSM3 486 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 OR5AU1Q8NGC0 362 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 PHYHIPQ92561 330 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 NEDD4LQ96PU5 975 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 OCSTAMPQ9BR26 566 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 PLGRKTQ9HBL7 147 aa14.09□□□□□ -0.15
COL6A1-204ENST00000486023 AK6Q9Y3D8 172 aaKnown RBP14.09□□□□□ -0.15
COL6A1-204ENST00000486023 A0A1W2PPI3 338 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 HSD17B6O14756 317 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 SLC31A2O15432 143 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 PDCD6O75340 191 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 IGKV1D-33P01593 117 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 IGKV1-33P01594 117 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 HBZP02008 142 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 GAPDHP04406 335 aaKnown RBP14.08□□□□□ -0.16
COL6A1-204ENST00000486023 UBBP0CG47 229 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 VSIG8P0DPA2 414 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 HSPA13P48723 471 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 OR52M1Q8NGK5 317 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 R3HDM4Q96D70 268 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 FAAP24Q9BTP7 215 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 TAF9BQ9HBM6 251 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 KCNIP1Q9NZI2 227 aa14.08□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A10PA6NDY2 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A18PA6NE21 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A16PA6NEW6 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A20PA6NIJ5 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A7PA6NKC0 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A12PA8MX19 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A5PA8MXJ8 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A23PA8MXZ1 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 ATP6V1G2O95670 118 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 AMY1AP04745 511 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 AMY2AP04746 511 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 UCHL1P09936 223 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A15PP0C7V4 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A13PP0C7W8 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A14PP0C7W9 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A24PP0C7X0 464 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 IL3RAP26951 378 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 LOXL3P58215 753 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 TPBGQ13641 420 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 TMEM91Q6ZNR0 172 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 PRSS48Q7RTY5 328 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 C6orf201Q7Z4U5 140 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 SETD6Q8TBK2 473 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 RBMXL1Q96E39 390 aaKnown RBP14.07□□□□□ -0.16
COL6A1-204ENST00000486023 MGLLQ99685 303 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 NICN1Q9BSH3 213 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 TMEM59Q9BXS4 323 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 WNT10AQ9GZT5 417 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 CHMP1AQ9HD42 196 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-204ENST00000486023 RAB9BQ9NP90 201 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 OR2S2Q9NQN1 319 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 MOB4Q9Y3A3 225 aa14.07□□□□□ -0.16
COL6A1-204ENST00000486023 TET2Q6N021 2002 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-204ENST00000486023 NOTCH1P46531 2555 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 IGHV1-3A0A0C4DH29 117 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 NCBP2LA6PVI3 153 aaKnown RBP14.06□□□□□ -0.16
COL6A1-204ENST00000486023 CPEP16870 476 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 CALRP27797 417 aaKnown RBP14.06□□□□□ -0.16
COL6A1-204ENST00000486023 RPS27AP62979 156 aaKnown RBP14.06□□□□□ -0.16
COL6A1-204ENST00000486023 EMX1Q04741 257 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-204ENST00000486023 MLLT11Q13015 90 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-204ENST00000486023 KHDC1LQ5JSQ8 128 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 C1orf100Q5SVJ3 147 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 THNSL2Q86YJ6 484 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 OR52L2PQ8NGH6 319 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 KCNG3Q8TAE7 436 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 SULT4A1Q9BR01 284 aa14.06□□□□□ -0.16
COL6A1-204ENST00000486023 TCRBV4S1A1TA0A5B7 111 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 FAM90A9PA6NNJ1 464 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 M0QZK8 103 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 CA11O75493 328 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 SC5DO75845 299 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 ARL6IP5O75915 188 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 GLAP06280 429 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 BLVRBP30043 206 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-204ENST00000486023 ZNF134P52741 427 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 CLDN12P56749 244 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 FABP5Q01469 135 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 TRAM1Q15629 374 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 TRAT1Q6PIZ9 186 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms