RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 LEUTXA8MZ59 168 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 NPIPB11E5RHQ5 1161 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 RNASEK-C17orf49H0YIS7 233 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 RAB27BO00194 218 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 HSPA12AO43301 675 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 WIPF1O43516 503 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 XRCC3O43542 346 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 DIRAS3O95661 229 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 NAPSAO96009 420 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 FSHBP01225 129 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 IGHV4-38-2P0DP08 117 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 GNB3P16520 340 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 DTYMKP23919 212 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 COX7A1P24310 79 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 CD34P28906 385 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 EFNB2P52799 333 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 DLX6P56179 175 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 TMEM50BP56557 158 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 HTD2P86397 168 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 AANATQ16613 207 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 SRSF7Q16629 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
SF3A1-208ENST00000485618 KLF17Q5JT82 389 aaPredicted RBP6.76□□□□□ -1.33
SF3A1-208ENST00000485618 PRAMEF5Q5TYX0 476 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 ZNF782Q6ZMW2 699 aaPredicted RBP6.76□□□□□ -1.33
SF3A1-208ENST00000485618 PRR18Q8N4B5 295 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 C8orf31Q8N9H6 132 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 BEND2Q8NDZ0 799 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 OR13A1Q8NGR1 328 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 OR10X1Q8NGY0 326 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 OR4K15Q8NH41 348 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 OR9G1Q8NH87 305 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 NDNFQ8TB73 568 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 PLPPR1Q8TBJ4 325 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 SSMEM1Q8WWF3 244 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 GHITMQ9H3K2 345 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 OR2S2Q9NQN1 319 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.76□□□□□ -1.33
SF3A1-208ENST00000485618 ABCB10Q9NRK6 738 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 MBNL3Q9NUK0 354 aaKnown RBP6.76□□□□□ -1.33
SF3A1-208ENST00000485618 CCDC59Q9P031 241 aaKnown RBP6.76□□□□□ -1.33
SF3A1-208ENST00000485618 ZNF69Q9UC07 566 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 AK3Q9UIJ7 227 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 A0A087X0M5 115 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 A0A0A6YYD4 124 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 IGHV2-26A0A0B4J1V2 119 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 A0A1B0GX30 115 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 OOSP1A8MZH6 123 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 FAM25AB3EWG3 89 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 FAM25CB3EWG5 89 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 FAM25GB3EWG6 89 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 TRDCB7Z8K6 153 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 C12orf77C9JDV5 145 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 H3BMQ9 156 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 TRIM77I1YAP6 450 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 F2RL2O00254 374 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 RGS5O15539 181 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 HBZP02008 142 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 CGB3P0DN86 165 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 CGB7P0DN87 165 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 RCC1P18754 421 aaPredicted RBP6.75□□□□□ -1.33
SF3A1-208ENST00000485618 ZBTB25P24278 435 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 BRS3P32247 399 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 SAA4P35542 130 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 BAMBIQ13145 260 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 MADCAM1Q13477 382 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 LTC4SQ16873 150 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 PLAC9Q5JTB6 97 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 LY6G6FQ5SQ64 297 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 BAIAP2L2Q6UXY1 529 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 BRD3OSQ6XYD6 125 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 PDZD9Q8IXQ8 264 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 C11orf42Q8N5U0 333 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 TMEM86BQ8N661 226 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 OR4A4PQ8NGN8 299 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 OR5R1Q8NH85 324 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 RFESDQ8TAC1 157 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 MRPL30Q8TCC3 161 aaKnown RBP6.75□□□□□ -1.33
SF3A1-208ENST00000485618 FAM216AQ8WUB2 273 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 ZFAND2BQ8WV99 257 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 CAPSLQ8WWF8 208 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 IL1F10Q8WWZ1 152 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 EDARADDQ8WWZ3 215 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 KIRREL1Q96J84 757 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 NAA50Q9GZZ1 169 aaKnown RBP6.75□□□□□ -1.33
SF3A1-208ENST00000485618 KCNK15Q9H427 330 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 ZNF286AQ9HBT8 521 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 Q9N2K0 584 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 DPM3Q9P2X0 92 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 JPT1Q9UK76 154 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 CEPT1Q9Y6K0 416 aa6.75□□□□□ -1.33
SF3A1-208ENST00000485618 IGHV3OR16-10A0A075B7F0 116 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 MEX3AA1L020 520 aaKnown RBP6.74□□□□□ -1.33
SF3A1-208ENST00000485618 FOXI3A8MTJ6 420 aaPredicted RBP6.74□□□□□ -1.33
SF3A1-208ENST00000485618 CLDN34H7C241 214 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 J3QR06 171 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 MFNGO00587 321 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 CRYBA1P05813 215 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 MELTFP08582 738 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 OMGP23515 440 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 S100A5P33763 92 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms