RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 LTBRP36941 435 aa16.88■□□□□ 0.29
RPUSD3-216ENST00000484134 ERVS71-1P61550 626 aa16.88■□□□□ 0.29
RPUSD3-216ENST00000484134 FBXO46Q6PJ61 603 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-216ENST00000484134 SCGB1C1Q8TD33 95 aa16.88■□□□□ 0.29
RPUSD3-216ENST00000484134 P2RX4Q99571 388 aa16.88■□□□□ 0.29
RPUSD3-216ENST00000484134 FGF23Q9GZV9 251 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-216ENST00000484134 WASF3Q9UPY6 502 aa16.88■□□□□ 0.29
RPUSD3-216ENST00000484134 KIAA1549Q9HCM3 1950 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 ZNF816-ZNF321PA0A0X1KG74 233 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 TCAPO15273 167 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 IAPPP10997 89 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 F2RP25116 425 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 MDH2P40926 338 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 PRSS8Q16651 343 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 COA6Q5JTJ3 125 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 FAM180AQ6UWF9 173 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 OR51H1Q8NH63 302 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 RAB24Q969Q5 203 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 NOL4LQ96MY1 436 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 ELOVL1Q9BW60 279 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 C2CD4DB7Z1M9 353 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 TP53I11O14683 189 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 TUBG1P23258 451 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 MRGPRGQ86SM5 289 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 Q8NFD4 153 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 OR51G1Q8NGK1 321 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 IL22RA2Q969J5 263 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 SMIM7Q9BQ49 75 aa16.87■□□□□ 0.29
RPUSD3-216ENST00000484134 CYTIPO60759 359 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 PSG2P11465 335 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 LIFP15018 202 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 PCSK4Q6UW60 755 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 C20orf204Q6ZNR8 217 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 ZNF845Q96IR2 970 aaPredicted RBP16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 OR2H1Q9GZK4 316 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 PRSS50Q9UI38 385 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 ZNF66Q6ZN08 573 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 RAB40CQ96S21 281 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 ATG101Q9BSB4 218 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 DDA1Q9BW61 102 aa16.86■□□□□ 0.29
RPUSD3-216ENST00000484134 IGKV1-39P01597 117 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 IGKV1D-39P04432 117 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 RTP5Q14D33 572 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 NCR3LG1Q68D85 454 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 PCGF1Q9BSM1 259 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 NAT8Q9UHE5 227 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 MAP1LC3B2A6NCE7 125 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 C3orf80F5H4A9 247 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 ZNF737O75373 536 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 ELLP55199 621 aaPredicted RBP16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 BEND2Q8NDZ0 799 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 PSMG3Q9BT73 122 aaPredicted RBP16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 MRPL37Q9BZE1 423 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 MAP1LC3BQ9GZQ8 125 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 PLK3Q9H4B4 646 aa16.85■□□□□ 0.29
RPUSD3-216ENST00000484134 IFNL4K9M1U5 179 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 IGKV1D-33P01593 117 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 IGKV1-33P01594 117 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 NUBP1P53384 320 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 NUTF2P61970 127 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 SRSF7Q16629 238 aaKnown RBP eCLIP16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 TMEM241Q24JQ0 296 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 LRRC75BQ2VPJ9 315 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 CACNG5Q9UF02 275 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 ATP23Q9Y6H3 246 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 CNOT4O95628 575 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 OR4A8P0C604 315 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 RPL23P62829 140 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 HNF4GQ14541 408 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 CYP2G1PQ6ZSU1 146 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 TMEM37Q8WXS4 190 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 RPUSD4Q96CM3 377 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 IER2Q9BTL4 223 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 ZNF391Q9UJN7 358 aa16.84■□□□□ 0.29
RPUSD3-216ENST00000484134 LRRC3CA6NJW4 275 aa16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 SYNGR2O43760 224 aa16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 DSCR4P56555 118 aaPredicted RBP16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 SLC10A1Q14973 349 aa16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 BSXQ3C1V8 233 aa16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 CENPVQ7Z7K6 275 aaPredicted RBP16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 RPP25LQ8N5L8 163 aaKnown RBP16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 NEK7Q8TDX7 302 aa16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 OR4C12Q96R67 309 aa16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 PSENENQ9NZ42 101 aa16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 MTCH1Q9NZJ7 389 aa16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 DIDO1Q9BTC0 2240 aaKnown RBP16.83■□□□□ 0.28
RPUSD3-216ENST00000484134 HMGB3O15347 200 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 GCGP01275 180 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 SERPINE2P07093 398 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 GALR1P47211 349 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 PDLIM4P50479 330 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 CASP6P55212 293 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 CLDN15P56746 228 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 TMEM41BQ5BJD5 291 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 ZNF324BQ6AW86 544 aaPredicted RBP16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 MYPOPQ86VE0 399 aaPredicted RBP16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 CPT1CQ8TCG5 803 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 AGMATQ9BSE5 352 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A10PA6NDY2 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A18PA6NE21 464 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms