RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 CABLES2Q9BTV7 478 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SUCNR1Q9BXA5 334 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 NMES1Q9C002 83 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ESRP2Q9H6T0 727 aaKnown RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM165Q9HC07 324 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 MSL2Q9HCI7 577 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 CHMP1AQ9HD42 196 aaPredicted RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 CA10Q9NS85 328 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 COQ3Q9NZJ6 369 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF581Q9P0T4 197 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 TAAR3PQ9P1P4 343 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 NDRG3Q9UGV2 375 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 BIRC6Q9NR09 4857 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM30CPA0ZSE6 113 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ATP6V1G2-DDX39BF2Z307 99 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.54□□□□□ -1.68
COL17A1-206ENST00000483876 GOSR2O14653 212 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 FSTL3O95633 263 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 PPYP01298 95 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 SCTP09683 121 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 PGAM2P15259 253 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 RPA2P15927 270 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 MUC1P15941 1255 aaPredicted RBP4.54□□□□□ -1.68
COL17A1-206ENST00000483876 TNFRSF1AP19438 455 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 GZMHP20718 246 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 VAMP1P23763 118 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 DUSP1P28562 367 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 GNRHRP30968 328 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 PRDX2P32119 198 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF81P51508 661 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 IL15RAQ13261 267 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 EFNB3Q15768 340 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ADIPOQQ15848 244 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 MSMPQ1L6U9 139 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 C2orf68Q2NKX9 166 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 LGALSLQ3ZCW2 172 aaPredicted RBP4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ABCA11PQ4W5N1 156 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 Q5BKY6 102 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 IGSF11Q5DX21 431 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 NCMAPQ5T1S8 102 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 TRAT1Q6PIZ9 186 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 GSG1LQ6UXU4 331 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 C20orf204Q6ZNR8 217 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 Q6ZPA2 131 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF767PQ75MW2 155 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 H1FOOQ8IZA3 346 aaPredicted RBP4.54□□□□□ -1.68
COL17A1-206ENST00000483876 CCDC71LQ8N9Z2 235 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ZBTB34Q8NCN2 500 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 OR2Z1Q8NG97 314 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 OR5D13Q8NGL4 314 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 OR10J5Q8NHC4 309 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 SGMS2Q8NHU3 365 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 NEK7Q8TDX7 302 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 FAM222BQ8WU58 562 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 RTN4IP1Q8WWV3 396 aaPredicted RBP4.54□□□□□ -1.68
COL17A1-206ENST00000483876 MAFIPQ8WZ33 124 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 RDH5Q92781 318 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ELMOD3Q96FG2 381 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 KIRREL1Q96J84 757 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 MEGF10Q96KG7 1140 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 SNX22Q96L94 193 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 MRPL37Q9BZE1 423 aaKnown RBP4.54□□□□□ -1.68
COL17A1-206ENST00000483876 MS4A5Q9H3V2 200 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 ZFP57Q9NU63 452 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 C1orf123Q9NWV4 160 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 KCNIP1Q9NZI2 227 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 IL36RNQ9UBH0 155 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 FBXO9Q9UK97 447 aaPredicted RBP4.54□□□□□ -1.68
COL17A1-206ENST00000483876 OR2W1Q9Y3N9 320 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 HSPB11Q9Y547 144 aa4.54□□□□□ -1.68
COL17A1-206ENST00000483876 HEATR1Q9H583 2144 aaKnown RBP4.54□□□□□ -1.68
COL17A1-206ENST00000483876 IGKV1-6A0A0C4DH72 117 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 A0A0D9SG52 128 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 TEX13DA0A0J9YY54 714 aaPredicted RBP4.53□□□□□ -1.68
COL17A1-206ENST00000483876 DUXBA0A1W2PPF3 345 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 OOEPA6NGQ2 149 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 ZSCAN5BA6NJL1 495 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 A6NLC8 198 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 LRRC30A6NM36 301 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 C17orf100A8MU93 164 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 SMLR1H3BR10 107 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 GPR31O00270 319 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 ABCD4O14678 606 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 MGST3O14880 152 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 MPPED1O15442 326 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 PSPNO60542 156 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF737O75373 536 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 IFNA21P01568 189 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 IGHV1-46P01743 117 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 LYL1P12980 280 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 AADACP22760 399 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 PSMB6P28072 239 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 S100GP29377 79 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 APOBEC3AP31941 199 aaPredicted RBP4.53□□□□□ -1.68
COL17A1-206ENST00000483876 SERPINF1P36955 418 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 PIGPP57054 158 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 HERV-K104P61576 105 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 HLA-DRB3P79483 266 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 TNFAIP6P98066 277 aaPredicted RBP4.53□□□□□ -1.68
COL17A1-206ENST00000483876 BSPH1Q075Z2 132 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms