RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 CHIAQ9BZP6 476 aa13.17□□□□□ -0.3
COL2A1-206ENST00000483376 RNF167Q9H6Y7 350 aa13.17□□□□□ -0.3
COL2A1-206ENST00000483376 DPM3Q9P2X0 92 aa13.17□□□□□ -0.3
COL2A1-206ENST00000483376 VPREB3Q9UKI3 123 aa13.17□□□□□ -0.3
COL2A1-206ENST00000483376 MGAT4AQ9UM21 535 aa13.17□□□□□ -0.3
COL2A1-206ENST00000483376 OOSP1A8MZH6 123 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 LY6LH3BQJ8 138 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 J3QR06 171 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 RAB27BO00194 218 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 SPINT2O43291 252 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 SLC2A2P11168 524 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-206ENST00000483376 ALDH3B2P48448 385 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 VEGFCP49767 419 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 ARL6IP1Q15041 203 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 LINC00311Q8N616 119 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 CCDC107Q8WV48 283 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 DUX5Q96PT3 197 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 SSX3Q99909 188 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 MMP28Q9H239 520 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL2A1-206ENST00000483376 GFOD1Q9NXC2 390 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 DAPK2Q9UIK4 370 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 ETV7Q9Y603 341 aa13.16□□□□□ -0.3
COL2A1-206ENST00000483376 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 LEUTXA8MZ59 168 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 BUB1B-PAK6H3BSN5 160 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 TOR1AO14656 332 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 HBZP02008 142 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 TFAP2AP05549 437 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 RCC1P18754 421 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-206ENST00000483376 NFYBP25208 207 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 CEACAM3P40198 252 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 EFNB2P52799 333 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 HTD2P86397 168 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 PLA2G7Q13093 441 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 HMGN3Q15651 99 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 PLAC9Q5JTB6 97 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 STEAP3Q658P3 488 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 ANKRD13BQ86YJ7 626 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 OR10R2Q8NGX6 335 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 RFESDQ8TAC1 157 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 RAB3CQ96E17 227 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 ARHGAP5-AS1Q96IT6 56 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 PECRQ9BY49 303 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 TAF9BQ9HBM6 251 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 C12orf4Q9NQ89 552 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 KCNIP1Q9NZI2 227 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 PSG11Q9UQ72 335 aa13.15□□□□□ -0.3
COL2A1-206ENST00000483376 AMMECR1Q9Y4X0 333 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-206ENST00000483376 A0A0B4J203 849 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 SERPINE3A8MV23 424 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 MFNGO00587 321 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 GPR137BO60478 399 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 GABARAPO95166 117 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 NDUFA7O95182 113 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 CLEC2LP0C7M8 214 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 MXD1Q05195 221 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 SSX2Q16385 188 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 DYNAPQ8N1N2 210 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 NDNFQ8TB73 568 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 PIFOQ8TCI5 191 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 CYYR1Q96J86 154 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 ABRACLQ9P1F3 81 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 AK3Q9UIJ7 227 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 JPT1Q9UK76 154 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 KCNK7Q9Y2U2 307 aa13.14□□□□□ -0.31
COL2A1-206ENST00000483376 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 SMIM30A4D0T7 59 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 FAM181BA6NEQ2 426 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 A6NJ64 397 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 H3BUX3 64 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 SDCBPO00560 298 aaPredicted RBP13.13□□□□□ -0.31
COL2A1-206ENST00000483376 HIST1H1DP16402 221 aaKnown RBP13.13□□□□□ -0.31
COL2A1-206ENST00000483376 ARHGDIBP52566 201 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 ZNF137PP52743 207 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 ACTG1P63261 375 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 FOXL1Q12952 345 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 MOGAT2Q3SYC2 334 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 UTF1Q5T230 341 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 TPTE2P1Q5T6R2 138 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 CCDC144NLQ6NUI1 221 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 Q6ZPA2 131 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 ZNF439Q8NDP4 499 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 GALMQ96C23 342 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 OCSTAMPQ9BR26 566 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 RAB18Q9NP72 206 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 PITPNC1Q9UKF7 332 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 MMP24Q9Y5R2 645 aa13.13□□□□□ -0.31
COL2A1-206ENST00000483376 A0A1B0GUS0 222 aa13.12□□□□□ -0.31
COL2A1-206ENST00000483376 DIRAS3O95661 229 aa13.12□□□□□ -0.31
COL2A1-206ENST00000483376 RPS19P39019 145 aaKnown RBP13.12□□□□□ -0.31
COL2A1-206ENST00000483376 MADCAM1Q13477 382 aa13.12□□□□□ -0.31
COL2A1-206ENST00000483376 SRSF7Q16629 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL2A1-206ENST00000483376 SLC25A48Q6ZT89 311 aaKnown RBP13.12□□□□□ -0.31
COL2A1-206ENST00000483376 OR1L1Q8NH94 360 aa13.12□□□□□ -0.31
COL2A1-206ENST00000483376 LGALS14Q8TCE9 139 aa13.12□□□□□ -0.31
COL2A1-206ENST00000483376 GCDHQ92947 438 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-206ENST00000483376 SLC25A46Q96AG3 418 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms