RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 FAM53AQ6NSI3 398 aaPredicted RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 TRAT1Q6PIZ9 186 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 CCBE1Q6UXH8 406 aaPredicted RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 ZNF782Q6ZMW2 699 aaPredicted RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 LDLRAD3Q86YD5 345 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 H1FOOQ8IZA3 346 aaPredicted RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 C11orf42Q8N5U0 333 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 LY6G5BQ8NDX9 201 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 OR8B3Q8NGG8 313 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 C8orf46Q8TAG6 207 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 UBALD1Q8TB05 177 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 GIMAP1Q8WWP7 306 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 FAM168AQ92567 244 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 NINJ1Q92982 152 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 DACT3Q96B18 629 aaPredicted RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 KIRREL1Q96J84 757 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 OR8B2Q96RD0 313 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 FXYD6Q9H0Q3 95 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 MMP28Q9H239 520 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 DPAGT1Q9H3H5 408 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 MCUBQ9NWR8 336 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 CALYQ9NYX4 217 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 OR6C3Q9NZP0 311 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 OR1A1Q9P1Q5 309 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 PCDHB10Q9UN67 800 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 UBE2J1Q9Y385 318 aaPredicted RBP6.8□□□□□ -1.32
USP4-210ENST00000483212 LINC00312Q9Y6C7 94 aa6.8□□□□□ -1.32
USP4-210ENST00000483212 TRGV10A0A0A0MS01 117 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 TRBV23-1A0A0A0MS06 115 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 IGHV4-61A0A0C4DH41 118 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 KBTBD11-OT1A0A1B0GTJ5 212 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 FAM240BA0A1B0GVZ2 78 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 hADV38S2A0JD32 116 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 ZNF729A6NN14 1252 aaPredicted RBP6.79□□□□□ -1.32
USP4-210ENST00000483212 A8MXK9 166 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 C22orf46C9J442 243 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 GPR37O15354 613 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 MMP23AO75900 390 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 CTXN2P0C2S0 81 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 DNASE1P24855 282 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 NPY4RP50391 375 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 MECP2P51608 486 aaKnown RBP6.79□□□□□ -1.32
USP4-210ENST00000483212 LOXL3P58215 753 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 DSCR9P59020 149 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 RPL31P62899 125 aaKnown RBP6.79□□□□□ -1.32
USP4-210ENST00000483212 HTD2P86397 168 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 PAX2Q02962 417 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 GNMTQ14749 295 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 RBMS2Q15434 407 aaKnown RBP6.79□□□□□ -1.32
USP4-210ENST00000483212 TRIM16LQ309B1 348 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 UTF1Q5T230 341 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 CLEC2AQ6UVW9 174 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 IDO2Q6ZQW0 420 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 BTN2A1Q7KYR7 527 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 NLRC3Q7RTR2 1065 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 ZNF565Q8N9K5 539 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 OR52L2PQ8NGH6 319 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 TERB2Q8NHR7 220 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 ENKURQ8TC29 256 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 ARL11Q969Q4 196 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 PRRT1Q99946 306 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 ZNF2Q9BSG1 426 aaPredicted RBP6.79□□□□□ -1.32
USP4-210ENST00000483212 PIMREGQ9BSJ6 248 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 MARVELD1Q9BSK0 173 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 PARP12Q9H0J9 701 aaKnown RBP6.79□□□□□ -1.32
USP4-210ENST00000483212 C20orf85Q9H1P6 137 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 NARFLQ9H6Q4 476 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 TAS2R3Q9NYW6 316 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 KCNIP1Q9NZI2 227 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 COPZ2Q9P299 210 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 LPAR3Q9UBY5 353 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 CLN8Q9UBY8 286 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 FLVCR2Q9UPI3 526 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 NUBP2Q9Y5Y2 271 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 PDZD2O15018 2839 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 HECTD1Q9ULT8 2610 aa6.79□□□□□ -1.32
USP4-210ENST00000483212 NAV2Q8IVL1 2488 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 DSCAML1Q8TD84 2053 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 VPS13CQ709C8 3753 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 A0A0B4J293 547 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 A0A1B0GVG6 124 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 C17orf98A8MV24 154 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 BET1O15155 118 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 PHF1O43189 567 aaPredicted RBP6.78□□□□□ -1.32
USP4-210ENST00000483212 PPYP01298 95 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 IFNA6P05013 189 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 CCL3L1P16619 93 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 AADACP22760 399 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 NFYAP23511 347 aaPredicted RBP6.78□□□□□ -1.32
USP4-210ENST00000483212 ZFP36P26651 326 aaKnown RBP6.78□□□□□ -1.32
USP4-210ENST00000483212 IL2RGP31785 369 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 FCGR2CP31995 323 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 ERVFRD-1P60508 538 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 CLEC12BQ2HXU8 276 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 SCGB2B2Q4G0G5 96 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 PLET1Q6UQ28 207 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 PRR18Q8N4B5 295 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 OR6F1Q8NGZ6 308 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 RFESDQ8TAC1 157 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms