RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 A0A0U1RQV1 116 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 LOC102725191A0A1B0GVB3 256 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 A0A1B0GW64 132 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 PLAC8L1A1L4L8 177 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 C12orf77C9JDV5 145 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 FAM72CH0Y354 149 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 H3BP45 60 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 J3KT08 172 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 XKRYO14609 159 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 PDCD6O75340 191 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 SCO1O75880 301 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 CDRT1O95170 752 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 NUDT14O95848 222 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 IGHMP01871 453 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 MRPL3P09001 348 aaKnown RBP3.2□□□□□ -1.9
VPS41-212ENST00000482217 TSPAN19P0C672 248 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 KLK2P20151 261 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 CCL1P22362 96 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 SRIP30626 198 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 CD70P32970 193 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 KLK7P49862 253 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 TDGF1P3P51864 188 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 HERV-K104P61576 105 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 NCALDP61601 193 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 BIKQ13323 160 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 PMVKQ15126 192 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 RGNQ15493 299 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 TAB1Q15750 504 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 DNLZQ5SXM8 178 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 FAM72AQ5TYM5 149 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 FAM72DQ6L9T8 149 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 UFSP1Q6NVU6 142 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 C6orf120Q7Z4R8 191 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 ZNF589Q86UQ0 364 aaPredicted RBP3.2□□□□□ -1.9
VPS41-212ENST00000482217 OOSP2Q86WS3 158 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 FAM72BQ86X60 149 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 ZNF433Q8N7K0 673 aaPredicted RBP3.2□□□□□ -1.9
VPS41-212ENST00000482217 STPG4Q8N801 248 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 SAMD12Q8N8I0 201 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 OR11H6Q8NGC7 330 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 OR5H6Q8NGV6 325 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 DCUN1D4Q92564 292 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 CCL17Q92583 94 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 FXYD5Q96DB9 178 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 ACY3Q96HD9 319 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 RNF157Q96PX1 679 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 METTL26Q96S19 204 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 DOHHQ9BU89 302 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 SMIM3Q9BZL3 60 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 WDR13Q9H1Z4 485 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 GNB4Q9HAV0 340 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 ACER3Q9NUN7 267 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 TMEM38BQ9NVV0 291 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 RBM12B-AS1Q9P1G2 102 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 PHIPQ8WWQ0 1821 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 NCKAP5O14513 1909 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 DENND4BO75064 1496 aaPredicted RBP3.2□□□□□ -1.9
VPS41-212ENST00000482217 PLCH2O75038 1416 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 TRAV8-2A0A0B4J237 113 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 TRAV26-2A0A0B4J265 109 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 IGHV3-20A0A0C4DH32 117 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 A0A0J9YY10 115 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 TEX50A0A1B0GTY4 177 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 A0A1B0GX51 115 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 A0A1B0GX78 115 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 C20orf202A1L168 122 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 C5orf63A6NC05 138 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 MSGN1A6NI15 193 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 D6RAR5 112 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 H0Y9J4 135 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ZNF432O94892 652 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 OR2A4O95047 310 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 KCNK2O95069 426 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ZNF682O95780 498 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 LALBAP00709 142 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 OR4A8P0C604 315 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ZNF30P17039 623 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ORM2P19652 201 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 AZU1P20160 251 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ZBTB25P24278 435 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 PSMB9P28065 219 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 AGTR1P30556 359 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 FCGR2CP31995 323 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 RPL29P47914 159 aaKnown RBP3.19□□□□□ -1.9
VPS41-212ENST00000482217 RPL34P49207 117 aaKnown RBP3.19□□□□□ -1.9
VPS41-212ENST00000482217 CTBP2P56545 445 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 H2BFSP57053 126 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 PNOCQ13519 176 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 NCMAPQ5T1S8 102 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ARL9Q6T311 187 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 HRCT1Q6UXD1 115 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 Q6ZSR6 202 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ZNF571Q7Z3V5 609 aaPredicted RBP3.19□□□□□ -1.9
VPS41-212ENST00000482217 DEFB128Q7Z7B8 93 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 TRPT1Q86TN4 253 aaKnown RBP3.19□□□□□ -1.9
VPS41-212ENST00000482217 IFT20Q8IY31 132 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 DEFB125Q8N687 156 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 SLC35G3Q8N808 338 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 OR8B12Q8NGG6 310 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 OR13C8Q8NGS7 320 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms