RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TRAPPC2LH3BP13 241 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 TMEM178BH3BS89 294 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 RP2O75695 350 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 ATG12O94817 140 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 IFNA17P01571 189 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 CD37P11049 281 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 HOXA4Q00056 320 aaPredicted RBP9.73□□□□□ -0.85
HPS4-212ENST00000481910 EXOSC2Q13868 293 aaKnown RBP9.73□□□□□ -0.85
HPS4-212ENST00000481910 ZNF404Q494X3 552 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 C1orf100Q5SVJ3 147 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 AWAT2Q6E213 333 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 FOXRED2Q8IWF2 684 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 LRRC75A-AS1Q8N1F1 130 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 BATF2Q8N1L9 274 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 FAM89BQ8N5H3 189 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 GCSAMQ8N6F7 178 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 ZSCAN4Q8NAM6 433 aaPredicted RBP9.73□□□□□ -0.85
HPS4-212ENST00000481910 MCFD2Q8NI22 146 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 ZNF488Q96MN9 340 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 CHODLQ9H9P2 273 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 SMURF1Q9HCE7 757 aa9.73□□□□□ -0.85
HPS4-212ENST00000481910 FAM212BQ9NTI7 297 aaPredicted RBP9.73□□□□□ -0.85
HPS4-212ENST00000481910 ANKRD17O75179 2603 aaKnown RBP9.73□□□□□ -0.85
HPS4-212ENST00000481910 IGKV1-12A0A0C4DH73 117 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 IFITM5A6NNB3 132 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 SLC17A2O00624 439 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 ZNF205O95201 554 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 LHBP01229 141 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 IGKV1D-12P01611 117 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 PGA5P0DJD9 388 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 GLRA1P23415 457 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 NPBWR2P48146 333 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 TMEM33P57088 247 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 RSU1Q15404 277 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 FAM201AQ5SY85 155 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 SFRP4Q6FHJ7 346 aaPredicted RBP9.72□□□□□ -0.85
HPS4-212ENST00000481910 GLIPR1L1Q6UWM5 242 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 SAXO1Q8IYX7 474 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 PXT1Q8NFP0 134 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 CREB3L1Q96BA8 519 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 CMSS1Q9BQ75 279 aaKnown RBP9.72□□□□□ -0.85
HPS4-212ENST00000481910 A0A0G2JK05 382 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 A8MV72 311 aaPredicted RBP9.72□□□□□ -0.85
HPS4-212ENST00000481910 SRRM5B3KS81 715 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 PPIHO43447 177 aaKnown RBP9.72□□□□□ -0.85
HPS4-212ENST00000481910 SFTPBP07988 381 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 BCL3P20749 454 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 PDLIM4P50479 330 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 CLDN12P56749 244 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 UBE2G2P60604 165 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 RAB11BQ15907 218 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 AKIRIN2Q53H80 203 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 SFXN4Q6P4A7 337 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 ASCL4Q6XD76 172 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 POC1AQ8NBT0 407 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 OR10K1Q8NGX5 313 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 FAM168AQ92567 244 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 NRIP2Q9BQI9 281 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 NDUFAF3Q9BU61 184 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 WDR13Q9H1Z4 485 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 STEAP1Q9UHE8 339 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 OPN4Q9UHM6 478 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 NPTNQ9Y639 398 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 TACC2O95359 2948 aa9.72□□□□□ -0.85
HPS4-212ENST00000481910 NAV2Q8IVL1 2488 aa9.71□□□□□ -0.85
HPS4-212ENST00000481910 PPIAL4EA0A075B759 164 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 TEX13DA0A0J9YY54 714 aaPredicted RBP9.71□□□□□ -0.86
HPS4-212ENST00000481910 FAM74A7A6NL05 159 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 PPIAL4DF5H284 164 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 F8VVB4 439 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 F8VWA3 439 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 WNT9BO14905 357 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 HPGDSO60760 199 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 KDM4BO94953 1096 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 CSTBP04080 98 aaKnown RBP9.71□□□□□ -0.86
HPS4-212ENST00000481910 PPIAL4FP0DN26 164 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 CALCBP10092 127 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 SLC2A2P11168 524 aaPredicted RBP9.71□□□□□ -0.86
HPS4-212ENST00000481910 EGR1P18146 543 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 SERPINA2P20848 420 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 ERVK11-1P61568 191 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 SLC22A6Q4U2R8 563 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 FAM74A3Q4VXF1 159 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 IDNKQ5T6J7 187 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 FAM166AQ6J272 317 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 Q8IYB0 196 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 SELENOHQ8IZQ5 122 aaKnown RBP9.71□□□□□ -0.86
HPS4-212ENST00000481910 OR51D1Q8NGF3 324 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 ZNF431Q8TF32 576 aaPredicted RBP9.71□□□□□ -0.86
HPS4-212ENST00000481910 RAB1CQ92928 201 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 SLC25A28Q96A46 364 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 SLC25A46Q96AG3 418 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 SEH1LQ96EE3 360 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 TIMD4Q96H15 378 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 MS4A7Q9GZW8 240 aaPredicted RBP9.71□□□□□ -0.86
HPS4-212ENST00000481910 PRDM13Q9H4Q3 707 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 RBFOX1Q9NWB1 397 aaKnown RBP9.71□□□□□ -0.86
HPS4-212ENST00000481910 RASL12Q9NYN1 266 aa9.71□□□□□ -0.86
HPS4-212ENST00000481910 DNAJB11Q9UBS4 358 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms