RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 DIAPH2-AS1Q14236 149 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 HSD17B12Q53GQ0 312 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 FBLN7Q53RD9 439 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 FAM27D1Q5T7N8 215 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 TRAT1Q6PIZ9 186 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 PRR18Q8N4B5 295 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 OR4F17Q8NGA8 305 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 WIPF2Q8TF74 440 aaPredicted RBP14.07□□□□□ -0.16
COL9A3-212ENST00000481800 PHYHIPQ92561 330 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 SGCDQ92629 289 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 Q96M66 194 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 OR4F4Q96R69 305 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 CCDC90BQ9GZT6 254 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 GFOD1Q9NXC2 390 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 GNG12Q9UBI6 72 aa14.07□□□□□ -0.16
COL9A3-212ENST00000481800 A0A1W2PPI3 338 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 UBE2QL1A1L167 161 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 ERICH4A6NGS2 130 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 SH2D7A6NKC9 451 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-212ENST00000481800 C12orf77C9JDV5 145 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 PDCD6O75340 191 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 MPIG6BO95866 241 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 SRMP19623 302 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 VHLP40337 213 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 HNF4GQ14541 408 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 IRF3Q14653 427 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 TMEM30BQ3MIR4 351 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 LIPKQ5VXJ0 399 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 MOB3BQ86TA1 216 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 C1QL4Q86Z23 238 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 R3HDM4Q96D70 268 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 NEDD4LQ96PU5 975 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 ANKRD60Q9BZ19 345 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 DUSP21Q9H596 190 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 KCNIP1Q9NZI2 227 aa14.06□□□□□ -0.16
COL9A3-212ENST00000481800 IGKV1D-33P01593 117 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 IGKV1-33P01594 117 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 AMY1AP04745 511 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 AMY2AP04746 511 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 REG1BP48304 166 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 HSPA13P48723 471 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 LOXL3P58215 753 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 ZNF816Q0VGE8 651 aaPredicted RBP14.05□□□□□ -0.16
COL9A3-212ENST00000481800 Q3ZCU0 254 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 NKAPLQ5M9Q1 402 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 LRRTM1Q86UE6 522 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 LINC00311Q8N616 119 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 C8orf31Q8N9H6 132 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 OR4X2Q8NGF9 303 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 TMEM203Q969S6 136 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 TET2Q6N021 2002 aaPredicted RBP14.05□□□□□ -0.16
COL9A3-212ENST00000481800 KIAA2026Q5HYC2 2103 aa14.05□□□□□ -0.16
COL9A3-212ENST00000481800 IGHV1-3A0A0C4DH29 117 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 A0A1W2PRX2 142 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 SC5DO75845 299 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 HBZP02008 142 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 GP2P55259 537 aaKnown RBP14.04□□□□□ -0.16
COL9A3-212ENST00000481800 C1orf100Q5SVJ3 147 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 SIGIRRQ6IA17 410 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 GAPTQ8N292 157 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 OR10V1Q8NGI7 309 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 OR1L1Q8NH94 360 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 KCNG3Q8TAE7 436 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 ISYNA1Q9NPH2 558 aa14.04□□□□□ -0.16
COL9A3-212ENST00000481800 TCRBV4S1A1TA0A5B7 111 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 FGF16O43320 207 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 UCHL1P09936 223 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 VSIG8P0DPA2 414 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 RCC1P18754 421 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-212ENST00000481800 HTR2CP28335 458 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 CD83Q01151 205 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 TPBGQ13641 420 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 TRAM1Q15629 374 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 OR10K2Q6IF99 312 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 FAM53AQ6NSI3 398 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-212ENST00000481800 IZUMO2Q6UXV1 221 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 TMEM59Q9BXS4 323 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 TAF9BQ9HBM6 251 aa14.03□□□□□ -0.16
COL9A3-212ENST00000481800 WNK1Q9H4A3 2382 aa14.02□□□□□ -0.16
COL9A3-212ENST00000481800 IGHV3-72A0A0B4J1Y9 119 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 ARL6IP5O75915 188 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 CRHBPP24387 322 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 PSMA1P25786 263 aaKnown RBP14.02□□□□□ -0.17
COL9A3-212ENST00000481800 RPS27AP62979 156 aaKnown RBP14.02□□□□□ -0.17
COL9A3-212ENST00000481800 SLC25A48Q6ZT89 311 aaKnown RBP14.02□□□□□ -0.17
COL9A3-212ENST00000481800 PRSS48Q7RTY5 328 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 C5orf56Q8N8D9 126 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 OR6M1Q8NGM8 313 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 RTN4IP1Q8WWV3 396 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-212ENST00000481800 CNBD2Q96M20 576 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 PLGRKTQ9HBL7 147 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 OR2S2Q9NQN1 319 aa14.02□□□□□ -0.17
COL9A3-212ENST00000481800 TSSC4Q9Y5U2 329 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-212ENST00000481800 NCBP2LA6PVI3 153 aaKnown RBP14.01□□□□□ -0.17
COL9A3-212ENST00000481800 ADARB2-AS1A8MUL3 147 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 G3V4G9 280 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 SLC22A1O15245 554 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 SLC31A2O15432 143 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 TXNL1O43396 289 aa14.01□□□□□ -0.17
COL9A3-212ENST00000481800 BPNT1O95861 308 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms