RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 TRAPPC2LQ9UL33 140 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 RAB26Q9ULW5 256 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 CMYA5Q8N3K9 4069 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 FAM90A9PA6NNJ1 464 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 SDCBPO00560 298 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-209ENST00000480900 SLC22A1O15245 554 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 PEX14O75381 377 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 FBXO24O75426 580 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 MPIG6BO95866 241 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 FAM106CPP0CH98 169 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 VHLP40337 213 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 VDAC2P45880 294 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-209ENST00000480900 RPS25P62851 125 aaKnown RBP13.59□□□□□ -0.23
HSPG2-209ENST00000480900 TBCEQ15813 527 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-209ENST00000480900 FBLN7Q53RD9 439 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 SYT6Q5T7P8 510 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-209ENST00000480900 TRAT1Q6PIZ9 186 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 TMEM91Q6ZNR0 172 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 LINC00311Q8N616 119 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 C11orf44Q8N8P7 122 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 OR4K15Q8NH41 348 aa13.59□□□□□ -0.23
HSPG2-209ENST00000480900 C12orf77C9JDV5 145 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 M0QZK8 103 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 SPINT2O43291 252 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 ATP6V1G2O95670 118 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 VSIG8P0DPA2 414 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 HTR2CP28335 458 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 RPS27AP62979 156 aaKnown RBP13.58□□□□□ -0.24
HSPG2-209ENST00000480900 ZNF554Q86TJ5 538 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 OR6M1Q8NGM8 313 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 OR56B4Q8NH76 319 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 KCNG3Q8TAE7 436 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 UBALD1Q8TB05 177 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 MGLLQ99685 303 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 OCSTAMPQ9BR26 566 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 TMEM59Q9BXS4 323 aa13.58□□□□□ -0.24
HSPG2-209ENST00000480900 A0A1W2PPE3 182 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 UBE2QL1A1L167 161 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 HSD17B6O14756 317 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 ARL6IP5O75915 188 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 BPNT1O95861 308 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 SNRNP70P08621 437 aaKnown RBP13.57□□□□□ -0.24
HSPG2-209ENST00000480900 CHATP28329 748 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 MAP2K4P45985 399 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 ZNF816Q0VGE8 651 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-209ENST00000480900 DIAPH2-AS1Q14236 149 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 TMEM95Q3KNT9 176 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 ZNF367Q7RTV3 350 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 DRAM1Q8N682 238 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 MBNL3Q9NUK0 354 aaKnown RBP13.57□□□□□ -0.24
HSPG2-209ENST00000480900 MOB4Q9Y3A3 225 aa13.57□□□□□ -0.24
HSPG2-209ENST00000480900 IGHV3-43A0A0B4J1X8 118 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 HBZP02008 142 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 GAPDHP04406 335 aaKnown RBP13.56□□□□□ -0.24
HSPG2-209ENST00000480900 AMY1AP04745 511 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 AMY2AP04746 511 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 IGHV3-43DP0DP04 118 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 CD28P10747 220 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 RCC1P18754 421 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-209ENST00000480900 IL3RAP26951 378 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 QRFPP83859 136 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 UNC119Q13432 240 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 ABCA11PQ4W5N1 156 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 OR10K2Q6IF99 312 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 OR1L1Q8NH94 360 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 FAM110DQ8TAY7 271 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-209ENST00000480900 NEDD4LQ96PU5 975 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 TM2D1Q9BX74 207 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 ACOT13Q9NPJ3 140 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 GNG12Q9UBI6 72 aa13.56□□□□□ -0.24
HSPG2-209ENST00000480900 IGHV1-3A0A0C4DH29 117 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 TMEM14DPA8MWL7 114 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 CCRL2O00421 344 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 SLC17A2O00624 439 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 FABP5Q01469 135 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 NKAPLQ5M9Q1 402 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 STEAP3Q658P3 488 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 SLC25A48Q6ZT89 311 aaKnown RBP13.55□□□□□ -0.24
HSPG2-209ENST00000480900 OR2W3Q7Z3T1 314 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 ZNF439Q8NDP4 499 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 MRPL30Q8TCC3 161 aaKnown RBP13.55□□□□□ -0.24
HSPG2-209ENST00000480900 GFI1Q99684 422 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 SULT4A1Q9BR01 284 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 KCNK15Q9H427 330 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 PLGRKTQ9HBL7 147 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 TAF9BQ9HBM6 251 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 KCNIP1Q9NZI2 227 aa13.55□□□□□ -0.24
HSPG2-209ENST00000480900 MRPS14O60783 128 aaKnown RBP13.54□□□□□ -0.24
HSPG2-209ENST00000480900 LPLP06858 475 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 TMEM11P17152 192 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 ZNF137PP52743 207 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 GABARAPL2P60520 117 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 HES1Q14469 280 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 HIST2H2BDQ6DRA6 164 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 FAM53AQ6NSI3 398 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-209ENST00000480900 NDUFA11Q86Y39 141 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 PRR18Q8N4B5 295 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 ST6GALNAC6Q969X2 333 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 CYYR1Q96J86 154 aa13.54□□□□□ -0.24
HSPG2-209ENST00000480900 SLC31A2O15432 143 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms