RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 GAPTQ8N292 157 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 DRAM1Q8N682 238 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 OR13C5Q8NGS8 318 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 KCNG3Q8TAE7 436 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 DPF1Q92782 380 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 UFD1Q92890 307 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 NEDD4LQ96PU5 975 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 OR5M11Q96RB7 305 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 MCRIP2Q9BUT9 160 aaKnown RBP9.13□□□□□ -0.95
CCM2-213ENST00000480658 SELENOIQ9C0D9 397 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 GHITMQ9H3K2 345 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 RIMS4Q9H426 269 aaPredicted RBP9.13□□□□□ -0.95
CCM2-213ENST00000480658 ZFP57Q9NU63 452 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 LIN7CQ9NUP9 197 aaKnown RBP9.13□□□□□ -0.95
CCM2-213ENST00000480658 ABRACLQ9P1F3 81 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 JPT1Q9UK76 154 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 BLOC1S6Q9UL45 172 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 PEX16Q9Y5Y5 336 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 SIRT4Q9Y6E7 314 aaPredicted RBP9.13□□□□□ -0.95
CCM2-213ENST00000480658 IGHV1-3A0A0C4DH29 117 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 SERPINE3A8MV23 424 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 H0YHG0 523 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 C15orf65H3BRN8 121 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 AP4M1O00189 453 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 PDCD6O75340 191 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 MOSP00540 346 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 IGKV1D-33P01593 117 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 IGKV1-33P01594 117 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 MT-ND4P03905 459 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 GNAO1P09471 354 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 OR5H8P0DN80 308 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 PSMD7P51665 324 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 GP2P55259 537 aaKnown RBP9.12□□□□□ -0.95
CCM2-213ENST00000480658 HTD2P86397 168 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 EBI3Q14213 229 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 SPHARQ15513 63 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 BEAN1Q3B7T3 259 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 C9orf152Q5JTZ5 239 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 BAIAP2L2Q6UXY1 529 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 SLC25A48Q6ZT89 311 aaKnown RBP9.12□□□□□ -0.95
CCM2-213ENST00000480658 SLC35E3Q7Z769 313 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 C5orf56Q8N8D9 126 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 RFESDQ8TAC1 157 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 Q96M66 194 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 CHCHD6Q9BRQ6 235 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 NECAP2Q9NVZ3 263 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 ZNF580Q9UK33 172 aa9.12□□□□□ -0.95
CCM2-213ENST00000480658 VWFP04275 2813 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 PNMA8CA0A1B0GUJ8 204 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 IGHG2P01859 326 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 CD24P25063 80 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 LOXL3P58215 753 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 MED22Q15528 200 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 LTC4SQ16873 150 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 ACSM3Q53FZ2 586 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 HSD17B12Q53GQ0 312 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 KHDC1LQ5JSQ8 128 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 RBM48Q5RL73 367 aaKnown RBP9.11□□□□□ -0.95
CCM2-213ENST00000480658 LY6G6FQ5SQ64 297 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 FAM71F2Q6NXP2 309 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 MOB3BQ86TA1 216 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 ZFP41Q8N8Y5 198 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 WFDC9Q8NEX5 89 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 OR6M1Q8NGM8 313 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 RTN4IP1Q8WWV3 396 aaPredicted RBP9.11□□□□□ -0.95
CCM2-213ENST00000480658 GALMQ96C23 342 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 URM1Q9BTM9 101 aaKnown RBP9.11□□□□□ -0.95
CCM2-213ENST00000480658 TMEM59Q9BXS4 323 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 ISYNA1Q9NPH2 558 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 MBNL3Q9NUK0 354 aaKnown RBP9.11□□□□□ -0.95
CCM2-213ENST00000480658 STEAP1Q9UHE8 339 aa9.11□□□□□ -0.95
CCM2-213ENST00000480658 MAGEA13PA6NCF6 341 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 NCBP2LA6PVI3 153 aaKnown RBP9.1□□□□□ -0.95
CCM2-213ENST00000480658 C12orf77C9JDV5 145 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 AMY1AP04745 511 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 AMY2AP04746 511 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 JUNBP17275 347 aaPredicted RBP9.1□□□□□ -0.95
CCM2-213ENST00000480658 HTR2CP28335 458 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 TMEM95Q3KNT9 176 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 C6orf141Q5SZD1 244 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 TEX38Q6PEX7 206 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 CCDC107Q8WV48 283 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 SGCDQ92629 289 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 LEAP2Q969E1 77 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 RASL11BQ9BPW5 248 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 CENPOQ9BU64 300 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 ABHD14AQ9BUJ0 271 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 ANKRD60Q9BZ19 345 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 OR2S2Q9NQN1 319 aa9.1□□□□□ -0.95
CCM2-213ENST00000480658 A0A1W2PPK0 400 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 ADARB2-AS1A8MUL3 147 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 PTGES3LE9PB15 166 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 G3V4G9 280 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 PIN1P1O15428 100 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 RGS10O43665 173 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 LANCL1O43813 399 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 HBZP02008 142 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 SRMP19623 302 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 RPS27AP62979 156 aaKnown RBP9.09□□□□□ -0.95
CCM2-213ENST00000480658 FBLN7Q53RD9 439 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms