RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 NEDD4LQ96PU5 975 aa12.26□□□□□ -0.45
CDK9-203ENST00000480353 CITED2Q99967 270 aaPredicted RBP12.26□□□□□ -0.45
CDK9-203ENST00000480353 TCRBV4S1A1TA0A5B7 111 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 UBE2QL1A1L167 161 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 ERICH4A6NGS2 130 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 CA11O75493 328 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 HNF4GQ14541 408 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 TMEM30BQ3MIR4 351 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 HSD17B12Q53GQ0 312 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 UTF1Q5T230 341 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 OCSTAMPQ9BR26 566 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 WNT10AQ9GZT5 417 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 GFOD1Q9NXC2 390 aa12.25□□□□□ -0.45
CDK9-203ENST00000480353 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
CDK9-203ENST00000480353 PIN1P1O15428 100 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 RGS10O43665 173 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 IGKV1D-33P01593 117 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 IGKV1-33P01594 117 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 REG1BP48304 166 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 LIPKQ5VXJ0 399 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 TMEM104Q8NE00 496 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 PHYHIPQ92561 330 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 Q96M66 194 aa12.24□□□□□ -0.45
CDK9-203ENST00000480353 RCC2Q9P258 522 aaKnown RBP12.24□□□□□ -0.45
CDK9-203ENST00000480353 A0A1W2PPI3 338 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 NCBP2LA6PVI3 153 aaKnown RBP12.23□□□□□ -0.45
CDK9-203ENST00000480353 C15orf65H3BRN8 121 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 PDCD6O75340 191 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 GLAP06280 429 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 SRMP19623 302 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 MYF6P23409 242 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 VHLP40337 213 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 HSPA13P48723 471 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 INSL4Q14641 139 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 TRAM1Q15629 374 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 OR10V1Q8NGI7 309 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 NRG4Q8WWG1 115 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 TMEM59Q9BXS4 323 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 PLGRKTQ9HBL7 147 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 CHMP1AQ9HD42 196 aaPredicted RBP12.23□□□□□ -0.45
CDK9-203ENST00000480353 TSSC4Q9Y5U2 329 aaPredicted RBP12.23□□□□□ -0.45
CDK9-203ENST00000480353 PLXNB1O43157 2135 aa12.23□□□□□ -0.45
CDK9-203ENST00000480353 IGHV1-3A0A0C4DH29 117 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 PSMB11A5LHX3 300 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 C12orf77C9JDV5 145 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 TXNL1O43396 289 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 HBZP02008 142 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 PF4P02776 101 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 CD33P20138 364 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 HTR2CP28335 458 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 RANBP1P43487 201 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 ZNF816Q0VGE8 651 aaPredicted RBP12.22□□□□□ -0.45
CDK9-203ENST00000480353 DIAPH2-AS1Q14236 149 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 Q3ZCU0 254 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 FAM27D1Q5T7N8 215 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 UNQ9370/PRO34162Q6UXP9 181 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 LINC00311Q8N616 119 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 OR2T10Q8NGZ9 312 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 KCNG3Q8TAE7 436 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 TMEM203Q969S6 136 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 BLOC1S6Q9UL45 172 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 MEGF8Q7Z7M0 2845 aa12.22□□□□□ -0.45
CDK9-203ENST00000480353 IGHV3-72A0A0B4J1Y9 119 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 FAM90A9PA6NNJ1 464 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 SERPINE3A8MV23 424 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 FGF16O43320 207 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 ARL6IP5O75915 188 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 RGS11O94810 467 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 PSMA1P25786 263 aaKnown RBP12.21□□□□□ -0.45
CDK9-203ENST00000480353 SLC35A2P78381 396 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 SLC35B1P78383 322 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 FBLN7Q53RD9 439 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 IZUMO2Q6UXV1 221 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 TGIF2LXQ8IUE1 241 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 FOXRED2Q8IWF2 684 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 C8orf31Q8N9H6 132 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 OR6M1Q8NGM8 313 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 OR1L1Q8NH94 360 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 SETD6Q8TBK2 473 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 CNBD2Q96M20 576 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 ANKRD60Q9BZ19 345 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 TAF9BQ9HBM6 251 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 ABRACLQ9P1F3 81 aa12.21□□□□□ -0.45
CDK9-203ENST00000480353 LSM2Q9Y333 95 aaKnown RBP12.21□□□□□ -0.45
CDK9-203ENST00000480353 G3V4G9 280 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 RCC1P18754 421 aaPredicted RBP12.2□□□□□ -0.46
CDK9-203ENST00000480353 LOXL3P58215 753 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 CD83Q01151 205 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 OR10K2Q6IF99 312 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 SLC35E3Q7Z769 313 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 LRRTM1Q86UE6 522 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 C5orf56Q8N8D9 126 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 WIPF2Q8TF74 440 aaPredicted RBP12.2□□□□□ -0.46
CDK9-203ENST00000480353 CHPT1Q8WUD6 406 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 RTN4IP1Q8WWV3 396 aaPredicted RBP12.2□□□□□ -0.46
CDK9-203ENST00000480353 SGCDQ92629 289 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 GALMQ96C23 342 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 RASL11BQ9BPW5 248 aa12.2□□□□□ -0.46
CDK9-203ENST00000480353 URM1Q9BTM9 101 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms