RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SLC29A1Q99808 456 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 ZNF251Q9BRH9 671 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 CST11Q9H112 138 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 BANF2Q9H503 90 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 OR2S2Q9NQN1 319 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 KIAA1456Q9P272 454 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 STEAP1Q9UHE8 339 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 ERGIC3Q9Y282 383 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 DSCAML1Q8TD84 2053 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 A0A087X0M5 115 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 A0A1B0GX30 115 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 HSPA12AO43301 675 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 LIMS3P0CW19 117 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 LIMS4P0CW20 117 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 SLC2A2P11168 524 aaPredicted RBP5.61□□□□□ -1.51
COL17A1-205ENST00000480127 CELP19835 753 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 CD40LGP29965 261 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 SLC6A1P30531 599 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 DGCR2P98153 550 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 ST3GAL4Q11206 333 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 RCN1Q15293 331 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 PNLIPRP3Q17RR3 467 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 TMEM30BQ3MIR4 351 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 RBM48Q5RL73 367 aaKnown RBP5.61□□□□□ -1.51
COL17A1-205ENST00000480127 C10orf99Q6UWK7 81 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 AHSA2Q719I0 299 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 STPG2Q8N412 459 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 NKAIN3Q8N8D7 197 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 BPIFB6Q8NFQ5 453 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 OR5M8Q8NGP6 311 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 OR8U1Q8NH10 309 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 ORAI1Q96D31 301 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 DUX3Q96PT4 197 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 OR14A2Q96R54 314 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 NCOR1P1Q9H4R4 102 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 FGF20Q9NP95 211 aaPredicted RBP5.61□□□□□ -1.51
COL17A1-205ENST00000480127 C8orf4Q9NR00 106 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 PARP11Q9NR21 331 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 ZFP57Q9NU63 452 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 FAM53CQ9NYF3 392 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 IL36GQ9NZH8 169 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 DIMT1Q9UNQ2 313 aaKnown RBP5.61□□□□□ -1.51
COL17A1-205ENST00000480127 U3KQK5 164 aa5.61□□□□□ -1.51
COL17A1-205ENST00000480127 A0A1W2PPI3 338 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 C3orf84H3BNL1 204 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 LY6LH3BQJ8 138 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 H7C2Y5 167 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 CCL24O00175 119 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 ORC5O43913 435 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 HBZP02008 142 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 NHLRC4P0CG21 123 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 MGMTP16455 207 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 GABRB1P18505 474 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 FUT3P21217 361 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 CD1BP29016 333 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 MYCNOSP40205 109 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 GPR12P47775 334 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 ADARB1P78563 741 aaKnown RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 GABPB1Q06547 395 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 ZNF816Q0VGE8 651 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 DOC2BQ14184 412 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 DIAPH2-AS1Q14236 149 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 DEFB136Q30KP8 78 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 GLT8D1Q68CQ7 371 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 XAF1Q6GPH4 301 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 ZNF497Q6ZNH5 498 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 LCNL1Q6ZST4 164 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 MRPL41Q8IXM3 137 aaKnown RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 LINC00482Q8N8I6 264 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 OR2AK2Q8NG84 335 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 OR8H1Q8NGG4 311 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 OR52M1Q8NGK5 317 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 APH1BQ8WW43 257 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 RTN4IP1Q8WWV3 396 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 RGP1Q92546 391 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 RNF166Q96A37 237 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 GALMQ96C23 342 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 MRPS24Q96EL2 167 aaKnown RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 EAF1Q96JC9 268 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 ABHD14AQ9BUJ0 271 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 TMED9Q9BVK6 235 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 PLGRKTQ9HBL7 147 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 LIN7CQ9NUP9 197 aaKnown RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 GFOD1Q9NXC2 390 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 SCN3BQ9NY72 215 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 ZNF107Q9UII5 783 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 SIRT4Q9Y6E7 314 aaPredicted RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 A3GALT2U3KPV4 340 aa5.6□□□□□ -1.51
COL17A1-205ENST00000480127 EPPK1P58107 5090 aaKnown RBP5.6□□□□□ -1.51
COL17A1-205ENST00000480127 A0A1W2PP11 408 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 SEC14L6B5MCN3 397 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 C12orf77C9JDV5 145 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 NPIPB11E5RHQ5 1161 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 PTGES3LE9PB15 166 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 PDCD6O75340 191 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 CA11O75493 328 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 WBP4O75554 376 aaKnown RBP5.59□□□□□ -1.51
COL17A1-205ENST00000480127 MT-ND4P03905 459 aa5.59□□□□□ -1.51
COL17A1-205ENST00000480127 RPLP1P05386 114 aaKnown RBP5.59□□□□□ -1.51
COL17A1-205ENST00000480127 GSTP1P09211 210 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms