RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 DUX4L3P0CJ86 424 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DUX4L4P0CJ87 422 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DUX4L5P0CJ88 424 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DUX4L6P0CJ89 424 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DUX4L7P0CJ90 424 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 SELLP14151 372 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 PRKACAP17612 351 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 FUT3P21217 361 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 GABRR1P24046 479 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 GLP1RP43220 463 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 GABRA2P47869 451 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 POU3F4P49335 361 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 RPS27AP62979 156 aaKnown RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 QRFPP83859 136 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 HTD2P86397 168 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 RSU1Q15404 277 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 SSX1Q16384 188 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 ODF4Q2M2E3 257 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 BEAN1Q3B7T3 259 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 HSD17B12Q53GQ0 312 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 SYT6Q5T7P8 510 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 RSBN1Q5VWQ0 802 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 CFAP161Q6P656 301 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DUX4L9Q6RFH8 374 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF497Q6ZNH5 498 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TMEM91Q6ZNR0 172 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 LRRTM1Q86UE6 522 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TPRA1Q86W33 373 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 ASCC1Q8N9N2 400 aaKnown RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 BOLLQ8N9W6 283 aaKnown RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 C19orf18Q8NEA5 215 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TRMT10AQ8TBZ6 339 aaKnown RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 COQ2Q96H96 371 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 AKR1E2Q96JD6 320 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF488Q96MN9 340 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 NEU1Q99519 415 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 GPER1Q99527 375 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 CLEC7AQ9BXN2 247 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TOLLIPQ9H0E2 274 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TMEM133Q9H2Q1 129 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 BEX1Q9HBH7 125 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TAS2R4Q9NYW5 299 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DPM3Q9P2X0 92 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 ONECUT1Q9UBC0 465 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DKK2Q9UBU2 259 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DUX4Q9UBX2 424 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 ST3GAL6Q9Y274 331 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 AMMECR1Q9Y4X0 333 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 CHD3Q12873 2000 aaKnown RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 A0A0A6YYH2 397 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 IGHV2-26A0A0B4J1V2 119 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 A0A0U1RQK1 487 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 TMEM30CPA0ZSE6 113 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 MEIOCA2RUB1 952 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 A6NIN4 97 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 A6NJ64 397 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 MARCH11A6NNE9 402 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 LEUTXA8MZ59 168 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 ANKRD65E5RJM6 399 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 PTGES3LE9PB15 166 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 LY6LH3BQJ8 138 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 LDLRAD4O15165 306 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 SPRY1O43609 319 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 ANGPTL7O43827 346 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 PDCD6O75340 191 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 OR7C1O76099 320 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 NAPSAO96009 420 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 PAHP00439 452 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 MT-ND4P03905 459 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF44P15621 663 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 HTR1DP28221 377 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 HTR2CP28335 458 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 SOX2P48431 317 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 PRRX1P54821 245 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 HOXA4Q00056 320 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 EMX1Q04741 257 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF816Q0VGE8 651 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 DYNC1I2Q13409 638 aaKnown RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 PMS2P11Q13670 270 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 EBI3Q14213 229 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF273Q14593 569 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 P2RY14Q15391 338 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 MED22Q15528 200 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 C17orf58Q2M2W7 97 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 LRRC75BQ2VPJ9 315 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 HLA-DRB5Q30154 266 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 TIMM50Q3ZCQ8 353 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 AWAT1Q58HT5 328 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 KRBOX4Q5JUW0 171 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 C6orf183Q5T699 404 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 FAM71F2Q6NXP2 309 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF880Q6PDB4 577 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF773Q6PK81 442 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 Q6ZS49 121 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 IL17RELQ6ZVW7 336 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 MOB1BQ7L9L4 216 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 CROCCP3Q8IVE0 287 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 FAM185AQ8N0U4 392 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms