RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 TMIGD2Q96BF3 282 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 REEP6Q96HR9 211 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 EBNA1BP2Q99848 306 aaKnown RBP0.07□□□□□ -2.4
HPS3-205ENST00000478525 MIEN1Q9BRT3 115 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 ZNF471Q9BX82 626 aaPredicted RBP0.07□□□□□ -2.4
HPS3-205ENST00000478525 EBPLQ9BY08 206 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 POTEKPQ9BYX7 375 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 TM6SF2Q9BZW4 377 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 GEMIN7Q9H840 131 aaKnown RBP0.07□□□□□ -2.4
HPS3-205ENST00000478525 PTTG3PQ9NZH4 202 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 VAPAQ9P0L0 249 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 IFNKQ9P0W0 207 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 ZNF706Q9Y5V0 76 aaPredicted RBP0.07□□□□□ -2.4
HPS3-205ENST00000478525 ANAPC1Q9H1A4 1944 aa0.07□□□□□ -2.4
HPS3-205ENST00000478525 ZFHX2Q9C0A1 2572 aaPredicted RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 GRIN2BQ13224 1484 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 TRGV5A0A0B4J1U4 118 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 A0A1W2PPM0 123 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 ANKRD20A5PA0PJZ0 165 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 TRAPPC13A5PLN9 417 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 MGAT4DA6NG13 374 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 H0YC42 278 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 M0QXV9 152 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 WRBO00258 174 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 GEMIN2O14893 280 aaKnown RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 NDUFB2O95178 105 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 LTAP01374 205 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 KLK1P06870 262 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 CRYGDP07320 174 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 PMCHP20382 165 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 PEBP1P30086 187 aaKnown RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 TSPOP30536 169 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 CSKP41240 450 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 GCLMP48507 274 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 UBE2MP61081 183 aaKnown RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 PAFAH1B2P68402 229 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 STK38Q15208 465 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 GUSBP1Q15486 140 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 PRAMEF20Q5VT98 475 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 DUPD1Q68J44 220 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 LGALS9CQ6DKI2 356 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 LAMTOR1Q6IAA8 161 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 RASL11AQ6T310 242 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 FAM43BQ6ZT52 329 aaPredicted RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 SSX7Q7RTT5 188 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 PRNTQ86SH4 94 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 SETD3Q86TU7 594 aaPredicted RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 C1orf158Q8N1D5 194 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 LINC00337Q8N6G1 96 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 PQLC3Q8N755 202 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 DRAXINQ8NBI3 349 aaPredicted RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 OR11G2Q8NGC1 345 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 OR52E5Q8NH55 327 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 FNDC9Q8TBE3 224 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 TCP10LQ8TDR4 215 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 CA5BP1Q8WTZ4 195 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 PIH1D2Q8WWB5 315 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 CCL17Q92583 94 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 NRGNQ92686 78 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 ACBD6Q9BR61 282 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 C11orf70Q9BRQ4 267 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 ADAT1Q9BUB4 502 aaKnown RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 NXF2Q9GZY0 626 aaKnown RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 EXO5Q9H790 373 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 METTL17Q9H7H0 456 aaPredicted RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 NIT2Q9NQR4 276 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 CHRAC1Q9NRG0 131 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 HHLA2Q9UM44 414 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 HHLA3Q9XRX5 114 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 POMPQ9Y244 141 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 AMMECR1Q9Y4X0 333 aaPredicted RBP0.06□□□□□ -2.4
HPS3-205ENST00000478525 MINOS1-NBL1R4GNA1 71 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 GREB1Q4ZG55 1949 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 COL18A1P39060 1754 aa0.06□□□□□ -2.4
HPS3-205ENST00000478525 MED12Q93074 2177 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 ATAD2BQ9ULI0 1458 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 TRAV8-2A0A0B4J237 113 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 A0A1B0GW54 56 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 ZNF705FA8MVS1 300 aaPredicted RBP0.05□□□□□ -2.4
HPS3-205ENST00000478525 K7EQS6 105 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 PSMD11O00231 422 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 STK16O75716 305 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 TRAPPC6AO75865 159 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 DHRS3O75911 302 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 LY6HO94772 140 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 MYO1DO94832 1006 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 PSMG1O95456 288 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 IVDP26440 423 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 PSMB8P28062 276 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 S100A2P29034 98 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 GABRA3P34903 492 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 EVI2BP34910 448 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 PSMD4P55036 377 aaKnown RBP0.05□□□□□ -2.4
HPS3-205ENST00000478525 TAS2R45P59539 299 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 GABARAPL2P60520 117 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 C1QTNF8P60827 252 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 RHOAP61586 193 aa0.05□□□□□ -2.4
HPS3-205ENST00000478525 RPL31P62899 125 aaKnown RBP0.05□□□□□ -2.4
HPS3-205ENST00000478525 HBG1P69891 147 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms