RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 FNDC1Q4ZHG4 1894 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-208ENST00000478423 DVL1O14640 695 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 HOXD4P09016 255 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-208ENST00000478423 SUCLG1P53597 346 aaKnown RBP12.29□□□□□ -0.44
NPHP4-208ENST00000478423 FAM3AP98173 230 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 C19orf48Q6RUI8 117 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 FKBP11Q9NYL4 201 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 WIPI2Q9Y4P8 454 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 DHRS7CA6NNS2 312 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 FAM157AC9JC47 383 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 CDX4O14627 284 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-208ENST00000478423 SCTP09683 121 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 RPL31P62899 125 aaKnown RBP12.29□□□□□ -0.44
NPHP4-208ENST00000478423 DTD1Q8TEA8 209 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 NEIL1Q96FI4 390 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-208ENST00000478423 GPR132Q9UNW8 380 aa12.29□□□□□ -0.44
NPHP4-208ENST00000478423 A0A0G2JMM0 328 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 A0A1W2PPB8 328 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 A0A1W2PRS3 328 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 KIR3DP1A8MWS1 328 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 ZP3P21754 424 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 KIR2DS2P43631 304 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 C4orf17Q53FE4 359 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 ZNF429Q86V71 674 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 OR2V2Q96R30 315 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 OR1A1Q9P1Q5 309 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 V9GYS6 101 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 CDRT15L2A8MXV6 281 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 PSG2P11465 335 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 ZNF154Q13106 437 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 LRRC75AQ8NAA5 344 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 VSTM2AQ8TAG5 236 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 SAT2Q96F10 170 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-208ENST00000478423 TMEM147Q9BVK8 224 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 PRDM14Q9GZV8 571 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 ATPIF1Q9UII2 106 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 RBP4P02753 201 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 CEACAM3P40198 252 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 BTNL8Q6UX41 500 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 C1orf174Q8IYL3 243 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 OR5B3Q8NH48 314 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 MUC6Q6W4X9 2439 aa12.28□□□□□ -0.44
NPHP4-208ENST00000478423 RGS13O14921 159 aa12.27□□□□□ -0.44
NPHP4-208ENST00000478423 COL10A1Q03692 680 aa12.27□□□□□ -0.44
NPHP4-208ENST00000478423 TGIF2LYQ8IUE0 185 aa12.27□□□□□ -0.44
NPHP4-208ENST00000478423 TGIF2LXQ8IUE1 241 aa12.27□□□□□ -0.44
NPHP4-208ENST00000478423 HSD17B10Q99714 261 aaKnown RBP12.27□□□□□ -0.44
NPHP4-208ENST00000478423 SLC35B3Q9H1N7 401 aa12.27□□□□□ -0.44
NPHP4-208ENST00000478423 A0A1W2PN81 502 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-208ENST00000478423 NQO2P16083 231 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 CHRNA7P36544 502 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 AQP3Q92482 292 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 A0A1W2PPE3 182 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 CLDN14O95500 239 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 RCC1P18754 421 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-208ENST00000478423 G6PCP35575 357 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 ARL16Q0P5N6 197 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 ATP6V1FQ16864 119 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 OR10G4Q8NGN3 311 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 OR10G9Q8NGN4 311 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 OR10G7Q8NGN6 311 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 TMEM14DPA8MWL7 114 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 MGST3O14880 152 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 OR2H2O95918 312 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 COX5BP10606 129 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 CDC34P49427 236 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-208ENST00000478423 OR2T6Q8NHC8 308 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 ITLN1Q8WWA0 313 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 ZDHHC16Q969W1 377 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 CTDSP1Q9GZU7 261 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 RCC2Q9P258 522 aaKnown RBP12.27□□□□□ -0.45
NPHP4-208ENST00000478423 CLN8Q9UBY8 286 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 NPTNQ9Y639 398 aa12.27□□□□□ -0.45
NPHP4-208ENST00000478423 USF3Q68DE3 2245 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 B3GALNT1O75752 331 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 NPBWR2P48146 333 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 FGF8P55075 233 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 EWSR1Q01844 656 aaKnown RBP eCLIP12.26□□□□□ -0.458e-8■■■■■ 31.8
NPHP4-208ENST00000478423 C17orf82Q86X59 251 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 NPDC1Q9NQX5 325 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 MMP24Q9Y5R2 645 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 PPIAL4EA0A075B759 164 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 PPIAL4DF5H284 164 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 PPIAL4FP0DN26 164 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 TMEM50BP56557 158 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 ZFP36L1Q07352 338 aaKnown RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 RTP5Q14D33 572 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 ACSM6Q6P461 480 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 KLF14Q8TD94 323 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 TMEM54Q969K7 222 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 ZNF837Q96EG3 531 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 SDHCQ99643 169 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 PPIAL4AQ9Y536 164 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 ZSWIM8A7E2V4 1837 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 LOC102723996A0A087X1L8 192 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 KCNAB3O43448 404 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms