RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ELP2Q6IA86 826 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 FAM71E1Q6IPT2 247 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 C3orf33Q6P1S2 294 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ALKAL1Q6UXT8 129 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 CALHM3Q86XJ0 350 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 PHF13Q86YI8 300 aaPredicted RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ZIC4Q8N9L1 334 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 OR4X1Q8NH49 305 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 MFSD8Q8NHS3 518 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 RASSF5Q8WWW0 418 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 TCEAL3Q969E4 200 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 CPNE2Q96FN4 548 aaPredicted RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 LINC01587Q99440 93 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 EBPLQ9BY08 206 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 DCSTAMPQ9H295 470 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 BOLA2Q9H3K6 86 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ARMC1Q9NVT9 282 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 BTRCQ9Y297 605 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 CARHSP1Q9Y2V2 147 aaKnown RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 YTHDF2Q9Y5A9 579 aaKnown RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ENPP4Q9Y6X5 453 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 LRP4O75096 1905 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 NPHP4O75161 1426 aaPredicted RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 TRAV8-3A0A0A6YYJ7 113 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 TEX50A0A1B0GTY4 177 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 OR6C6A6NF89 314 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 KRBOX1C9JBD0 128 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 NDUFC2-KCTD14E9PQ53 114 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 K7EQS6 105 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 M0QYV0 167 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 IFNA21P01568 189 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 IGLV2-8P01709 118 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 GUSBP08236 651 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 CECR9P0C854 216 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 IL3RAP26951 378 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 UBE2AP49459 152 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 ERFP50548 548 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 RWDD2BP57060 319 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 GRB2P62993 217 aaKnown RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 TFAMQ00059 246 aaKnown RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 RUNX1Q01196 453 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 MEF2CQ06413 473 aaPredicted RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 EIF4EBP1Q13541 118 aaPredicted RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 PYCR3Q53H96 274 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 CLLU1OSQ5K130 101 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 HES5Q5TA89 166 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 FAM222AQ5U5X8 452 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 LYPD2Q6UXB3 125 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 VN1R4Q7Z5H5 301 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 GALNT10Q86SR1 603 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC35F6Q8N357 371 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC25A45Q8N413 288 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC35G3Q8N808 338 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 OR2M7Q8NG81 312 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 OR10J5Q8NHC4 309 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 TNFAIP8L1Q8WVP5 186 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 TIMM17AQ99595 171 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNF649Q9BS31 505 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNF717Q9BY31 904 aaPredicted RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 GNB1LQ9BYB4 327 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 MRPL20Q9BYC9 149 aaKnown RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 LINC00597Q9H2U6 94 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 ZSCAN16Q9H4T2 348 aaPredicted RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNF430Q9H8G1 570 aaPredicted RBP2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 IDI2-AS1Q9NZ38 188 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 INSIG2Q9Y5U4 225 aa2.34□□□□□ -2.03
SMARCA1-204ENST00000478420 ZBED9Q6R2W3 1325 aa2.34□□□□□ -2.04
SMARCA1-204ENST00000478420 NCOA1Q15788 1441 aa2.34□□□□□ -2.04
SMARCA1-204ENST00000478420 TMEM131Q92545 1883 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 VWA8A3KMH1 1905 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 IGHV2-26A0A0B4J1V2 119 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 IGHV3-74A0A0B4J1X5 117 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 D6RAR5 112 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 GYG2O15488 501 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 ANGPTL7O43827 346 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 CD5LO43866 347 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 STK16O75716 305 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 OR2A4O95047 310 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 KCNK2O95069 426 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 YIF1AO95070 293 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 GABARAPO95166 117 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 DHFRP00374 187 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 HLA-DPB1P04440 258 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 CRYGDP07320 174 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 GTF2F2P13984 249 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 SERPINB1P30740 379 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 OR1E2P47887 323 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 ZNF136P52737 540 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 GNG3P63215 75 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 ADIGQ0VDE8 80 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 CDK10Q15131 360 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 IRF4Q15306 451 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 ATP6AP1LQ52LC2 224 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 CENPWQ5EE01 88 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 TMEM205Q6UW68 189 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 SCGB1D4Q6XE38 83 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 Q6ZSR6 202 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 FAM19A3Q7Z5A8 133 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 SMIM20Q8N5G0 67 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 ZNF645Q8N7E2 425 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms