RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MPV17LQ2QL34 196 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 PIGYQ3MUY2 71 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 FAM209BQ5JX69 171 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 DHRS7BQ6IAN0 325 aaPredicted RBP4.22□□□□□ -1.73
SF3B6-202ENST00000478050 HAGHLQ6PII5 290 aaPredicted RBP4.22□□□□□ -1.73
SF3B6-202ENST00000478050 BTNL8Q6UX41 500 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 FBXW12Q6X9E4 464 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 MRPL21Q7Z2W9 205 aaKnown RBP4.22□□□□□ -1.73
SF3B6-202ENST00000478050 LINC00596Q86U02 117 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 FOXRED2Q8IWF2 684 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 MKXQ8IYA7 352 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 ZDHHC23Q8IYP9 409 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 COMMD1Q8N668 190 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF611Q8N823 705 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 UBAC2Q8NBM4 344 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 OR56B2PQ8NGI1 322 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 OR4A4PQ8NGN8 299 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 ABHD3Q8WU67 409 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 EXTL1Q92935 676 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 MARS2Q96GW9 593 aaKnown RBP4.22□□□□□ -1.73
SF3B6-202ENST00000478050 ABHD14BQ96IU4 210 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 IP6K3Q96PC2 410 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 SPIN2AQ99865 258 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 SPIN2BQ9BPZ2 258 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 PRRG4Q9BZD6 226 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 ARV1Q9H2C2 271 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 LIME1Q9H400 295 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 PLK3Q9H4B4 646 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 RHOFQ9HBH0 211 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 SPACA1Q9HBV2 294 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 SLC2A9Q9NRM0 540 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 SLC7A10Q9NS82 523 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 FAM212BQ9NTI7 297 aaPredicted RBP4.22□□□□□ -1.73
SF3B6-202ENST00000478050 UQCC1Q9NVA1 299 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 RCC2Q9P258 522 aaKnown RBP4.22□□□□□ -1.73
SF3B6-202ENST00000478050 AMDHD2Q9Y303 409 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 DNAJC13O75165 2243 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 RELNP78509 3460 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 DNHD1Q96M86 4753 aa4.21□□□□□ -1.73
SF3B6-202ENST00000478050 MED12LQ86YW9 2145 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TRBV6-6A0A0A6YYG2 114 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 KIR2DS1A0A191URI9 304 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 FAM74A7A6NL05 159 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 OR5B21A6NL26 309 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TRDCB7Z8K6 153 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 ATP6V1G2-DDX39BF2Z307 99 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 RNASEK-C17orf49H0YIS7 233 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TRAPPC2LH3BP13 241 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 GPR31O00270 319 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MPPED1O15442 326 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 NUPL2O15504 423 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 ST8SIA3O43173 380 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PHF1O43189 567 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 SS18L1O75177 396 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TSPAN9O75954 239 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 OR7C1O76099 320 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 CDS2O95674 445 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PPYP01298 95 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MBPP02686 304 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TK1P04183 234 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 HEXAP06865 529 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 SEC11BP0C7V7 166 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MMP9P14780 707 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MUC1P15941 1255 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 ADCYAP1P18509 176 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 RCC1P18754 421 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PVALBP20472 110 aaPredicted RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 BCL3P20749 454 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 KIR2DS4P43632 304 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 LPAR6P43657 344 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 RAB5CP51148 216 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM33P57088 247 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TMPRSS3P57727 454 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PLGLB1Q02325 96 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 CD69Q07108 199 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PMS2P11Q13670 270 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 GNMTQ14749 295 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 KIR2DS1Q14954 304 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 OR1C1Q15619 314 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 GUCA2BQ16661 112 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 CEACAM21Q3KPI0 293 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 FAM74A3Q4VXF1 159 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PHLDA2Q53GA4 152 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 SPINK14Q6IE38 97 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 OR2A2Q6IF42 318 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 Q6ZRG5 221 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 SLC25A26Q70HW3 274 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 LYZL2Q7Z4W2 148 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 LDLRAD3Q86YD5 345 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 CALHM1Q8IU99 346 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 FAM219AQ8IW50 185 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 MCEMP1Q8IX19 187 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 PUSL1Q8N0Z8 303 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM251Q8N6I4 163 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 STPG3Q8N7X2 389 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF565Q8N9K5 539 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 BOLLQ8N9W6 283 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 CPEB3Q8NE35 698 aaKnown RBP4.21□□□□□ -1.74
SF3B6-202ENST00000478050 OR5A2Q8NGI9 324 aa4.21□□□□□ -1.74
SF3B6-202ENST00000478050 OR5L1Q8NGL2 311 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms