RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 IGHV3-43DP0DP04 118 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 ZNF691Q5VV52 312 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 AQP12AQ8IXF9 295 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 SUMF2Q8NBJ7 301 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 NRBF2Q96F24 287 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 ELOVL1Q9BW60 279 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 KIAA1456Q9P272 454 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 TNCP24821 2201 aa15.52■□□□□ 0.08
PDLIM1-202ENST00000477757 SOX15O60248 233 aa15.52■□□□□ 0.08
PDLIM1-202ENST00000477757 ANKRD13BQ86YJ7 626 aa15.52■□□□□ 0.08
PDLIM1-202ENST00000477757 LINC00476Q8WZB0 136 aa15.52■□□□□ 0.08
PDLIM1-202ENST00000477757 FLYWCH2Q96CP2 140 aaKnown RBP15.52■□□□□ 0.08
PDLIM1-202ENST00000477757 IFT22Q9H7X7 185 aa15.52■□□□□ 0.08
PDLIM1-202ENST00000477757 ZNF446Q9NWS9 450 aa15.52■□□□□ 0.08
PDLIM1-202ENST00000477757 ZNF581Q9P0T4 197 aa15.52■□□□□ 0.08
PDLIM1-202ENST00000477757 SULT1B1O43704 296 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 LANCL1O43813 399 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 ORC5O43913 435 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 DCTN3O75935 186 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 ATP6V1E1P36543 226 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 CCR9P51686 369 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 CRIP2P52943 208 aaPredicted RBP15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 ACTBP60709 375 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 HSP90B2PQ58FF3 399 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 ANKRD60Q9BZ19 345 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 RETNQ9HD89 108 aa15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 FOXA2Q9Y261 457 aaPredicted RBP15.51■□□□□ 0.07
PDLIM1-202ENST00000477757 A0A1W2PN81 502 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 C12orf77C9JDV5 145 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 ARPC1BO15143 372 aaKnown RBP15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 MITFO75030 526 aaPredicted RBP15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 FKBP6O75344 327 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 HSPB1P04792 205 aaKnown RBP15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 CHRNA7P36544 502 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 NDPQ00604 133 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 ECSCRQ19T08 205 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 C5orf64Q2M2E5 130 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 LPCAT4Q643R3 524 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 CASTOR1Q8WTX7 329 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 RSRP1Q9BUV0 290 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 CST11Q9H112 138 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 ARL2BPQ9Y2Y0 163 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 FBXO7Q9Y3I1 522 aa15.5■□□□□ 0.07
PDLIM1-202ENST00000477757 OR4C45A6NMZ5 311 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 GABRPO00591 440 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 NBR2O15453 112 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 CNTFRP26992 372 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 ZNF134P52741 427 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 TMED1Q13445 227 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 TMEM30BQ3MIR4 351 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 CT45A1Q5HYN5 189 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 NHLRC3Q5JS37 347 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 KCTD20Q7Z5Y7 419 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 TCTEX1D1Q8N7M0 179 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 OR10K1Q8NGX5 313 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 CT45A3Q8NHU0 189 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 TNFAIP8L1Q8WVP5 186 aa15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 CPNE2Q96FN4 548 aaPredicted RBP15.49■□□□□ 0.07
PDLIM1-202ENST00000477757 OR7C1O76099 320 aaPredicted RBP15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 IGHV3-11P01762 117 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 HTR1AP08908 422 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 RSU1Q15404 277 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 PYHIN1Q6K0P9 492 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 PARP16Q8N5Y8 322 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 OR5D14Q8NGL3 314 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 CCDC107Q8WV48 283 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 RITA1Q96K30 269 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 ZNF251Q9BRH9 671 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 THAP7Q9BT49 309 aaPredicted RBP15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 HIPK2Q9H2X6 1198 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 TUBA4BQ9H853 241 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 GNG12Q9UBI6 72 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 ERGIC3Q9Y282 383 aa15.48■□□□□ 0.07
PDLIM1-202ENST00000477757 SLC16A6O15403 523 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 RBM11P57052 281 aaKnown RBP15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 LIN54Q6MZP7 749 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 ASCL4Q6XD76 172 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 ZNF497Q6ZNH5 498 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 SERPINA12Q8IW75 414 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 FAM110AQ9BQ89 295 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 MED4Q9NPJ6 270 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 ST3GAL6Q9Y274 331 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 HECTD4Q9Y4D8 3996 aa15.47■□□□□ 0.07
PDLIM1-202ENST00000477757 NDUFA3O95167 84 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 CSTBP04080 98 aaKnown RBP15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 RAB40BQ12829 278 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 LRRC36Q1X8D7 754 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 STEAP3Q658P3 488 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 GTSCR1Q86UQ5 136 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 NPBQ8NG41 125 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 OR10V1Q8NGI7 309 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 DDB2Q92466 427 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 RFKQ969G6 155 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 GPER1Q99527 375 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 TMED9Q9BVK6 235 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 FAM192AQ9GZU8 254 aa15.46■□□□□ 0.07
PDLIM1-202ENST00000477757 H0Y980 276 aa15.45■□□□□ 0.06
PDLIM1-202ENST00000477757 AIPO00170 330 aa15.45■□□□□ 0.06
PDLIM1-202ENST00000477757 SLC25A17O43808 307 aa15.45■□□□□ 0.06
PDLIM1-202ENST00000477757 RGS11O94810 467 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms