RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SHISA2Q6UWI4 295 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 ASCL4Q6XD76 172 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 LYSMD2Q8IV50 215 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 BEND2Q8NDZ0 799 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 OR56B1Q8NGI3 324 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 OR4F5Q8NH21 305 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 PPP1R35Q8TAP8 253 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 MRPS24Q96EL2 167 aaKnown RBP6.72□□□□□ -1.33
HDAC6-221ENST00000477561 SDHCQ99643 169 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-221ENST00000477561 SEBOXQ9HB31 216 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-221ENST00000477561 BEX1Q9HBH7 125 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 IL36GQ9NZH8 169 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 VPREB3Q9UKI3 123 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 TRAV18A0A075B6X5 111 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 CLPSL1A2RUU4 121 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 FAM172BPA6NC97 362 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 POM121CA8CG34 1229 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 VGLL3A8MV65 326 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 H3BUI4 141 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 GABARAPH6UMI1 98 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 SULT1C2O00338 296 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 SLC33A1O00400 549 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-221ENST00000477561 NDUFA7O95182 113 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 HLA-DQB1P01920 261 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 GSTT2BP0CG30 244 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 MGMTP16455 207 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 SERPINA2P20848 420 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 LMO1P25800 156 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 ERP29P30040 261 aaKnown RBP6.71□□□□□ -1.34
HDAC6-221ENST00000477561 P2RX3P56373 397 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 RPS27AP62979 156 aaKnown RBP6.71□□□□□ -1.34
HDAC6-221ENST00000477561 IFITM3Q01628 133 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 PLA2G7Q13093 441 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 UNC119Q13432 240 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 MADCAM1Q13477 382 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 SSX2Q16385 188 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 BAK1Q16611 211 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 LRRC75BQ2VPJ9 315 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 PIGYQ3MUY2 71 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 LDLRAD2Q5SZI1 272 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 PRAMEF5Q5TYX0 476 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 OLFML2AQ68BL7 652 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 DHRS7BQ6IAN0 325 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-221ENST00000477561 OR10K2Q6IF99 312 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 Q6ZSV7 163 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 SNX29P2Q8IUI4 249 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 IZUMO1Q8IYV9 350 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 DYNAPQ8N1N2 210 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 DTX3Q8N9I9 347 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 POC5Q8NA72 575 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 CHST4Q8NCG5 386 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 OR51T1Q8NGJ9 327 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 OR13D1Q8NGV5 346 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 OR10R2Q8NGX6 335 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 LINC01006Q8NI28 216 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 SMIM4Q8WVI0 70 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 FCAMRQ8WWV6 532 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 ABHD1Q96SE0 405 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 THAP7Q9BT49 309 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-221ENST00000477561 TM2D1Q9BX74 207 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 MEGF9Q9H1U4 602 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 KCNK15Q9H427 330 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 SCPEP1Q9HB40 452 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 RHOFQ9HBH0 211 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF581Q9P0T4 197 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 LINC00312Q9Y6C7 94 aa6.71□□□□□ -1.34
HDAC6-221ENST00000477561 TRGV10A0A0A0MS01 117 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 TRAV24A0A0B4J272 114 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 A0A1W2PP11 408 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 FUOMA2VDF0 154 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 CENPXA8MT69 81 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 ODF3BA8MYP8 253 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 RAB27BO00194 218 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 PTTG1O95997 202 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 GSTP1P09211 210 aaKnown RBP6.7□□□□□ -1.34
HDAC6-221ENST00000477561 PRSS3P35030 304 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 GDNFP39905 211 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 VEGFCP49767 419 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 AP3S2P59780 193 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 KRTAP10-3P60369 221 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 SSBP1Q04837 148 aaKnown RBP6.7□□□□□ -1.34
HDAC6-221ENST00000477561 ASAH1Q13510 395 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 TRIM16LQ309B1 348 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 PAN3Q58A45 887 aaKnown RBP6.7□□□□□ -1.34
HDAC6-221ENST00000477561 KRBOX4Q5JUW0 171 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF626Q68DY1 528 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF57Q68EA5 555 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-221ENST00000477561 ELP2Q6IA86 826 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 SLC35E4Q6ICL7 350 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 MZT2BQ6NZ67 158 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 OSR2Q8N2R0 312 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 FAM89BQ8N5H3 189 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 TMEM104Q8NE00 496 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 OR11H6Q8NGC7 330 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 OR5R1Q8NH85 324 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 SGMS2Q8NHU3 365 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 PIFOQ8TCI5 191 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 DEDD2Q8WXF8 326 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 COQ2Q96H96 371 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 C7orf50Q9BRJ6 194 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms