RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 LECT2O14960 151 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 UBDO15205 165 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 CALUO43852 315 aaPredicted RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 SHOX2O60902 331 aaPredicted RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 ATP5HO75947 161 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 HLA-DRAP01903 254 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 IGKV1-16P04430 117 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 CD99P14209 185 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 NQO2P16083 231 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 SPNP16150 400 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 PSMB9P28065 219 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 CRABP1P29762 137 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 TSPOP30536 169 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 COILP38432 576 aaPredicted RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 UBE2KP61086 200 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 VBP1P61758 197 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 VSNL1P62760 191 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 FADDQ13158 208 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 ITGB3BPQ13352 177 aaPredicted RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 MMDQ15546 238 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 SNCBQ16143 134 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 PSG3Q16557 428 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 C18orf21Q32NC0 220 aaPredicted RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 TMEM31Q5JXX7 168 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 CDKL4Q5MAI5 379 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 TCF23Q7RTU1 214 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 OLIG3Q7RTU3 272 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 SELENOHQ8IZQ5 122 aaKnown RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 SLC25A45Q8N413 288 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 KCTD4Q8WVF5 259 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 CLDN23Q96B33 292 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 ZNF514Q96K75 400 aaPredicted RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 PRRG3Q9BZD7 231 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 DERL2Q9GZP9 239 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 RAB1BQ9H0U4 201 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 FBXL15Q9H469 300 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 ZNF286AQ9HBT8 521 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 TMBIM4Q9HC24 238 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 MS4A12Q9NXJ0 267 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 PAQR5Q9NXK6 330 aaPredicted RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 CLEC2DQ9UHP7 191 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 SCML1Q9UN30 329 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 POFUT2Q9Y2G5 429 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 TBL2Q9Y4P3 447 aaKnown RBP1.26□□□□□ -2.21
TARDBP-208ENST00000477447 PHLDA3Q9Y5J5 127 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 HSPE1-MOB4S4R3N1 261 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 NCOA3Q9Y6Q9 1424 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 TRAV8-2A0A0B4J237 113 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 LOC105371267A0A1B0GV96 52 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 GOLGA8IPA6NC78 632 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 TRPC5OSA6NMA1 111 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 C17orf98A8MV24 154 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 CDIPTO14735 213 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 SLC25A20O43772 301 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 ZMPSTE24O75844 475 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 CIAO1O76071 339 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 SERPINA6P08185 405 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 CTXN2P0C2S0 81 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 P0DMU3 169 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 FAM231AP0DMU4 169 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 FAM231CP0DMU5 169 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 GTF2H1P32780 548 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 RPA3P35244 121 aaPredicted RBP1.25□□□□□ -2.21
TARDBP-208ENST00000477447 HSPA13P48723 471 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 RWDD2BP57060 319 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 UBE2G2P60604 165 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 ACTBP60709 375 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 RHOAP61586 193 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 SKP1P63208 163 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 ACTG1P63261 375 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 FOXF1Q12946 379 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 CLVS2Q5SYC1 327 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 Q6ZT83 130 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 CLEC20AQ6ZU45 233 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 DCXRQ7Z4W1 244 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 FAM19A3Q7Z5A8 133 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 RBM45Q8IUH3 476 aaKnown RBP1.25□□□□□ -2.21
TARDBP-208ENST00000477447 KRTCAP2Q8N6L1 136 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 OR5C1Q8NGR4 320 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 LRRC20Q8TCA0 184 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 SPPL2BQ8TCT7 592 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 PPP1R14BQ96C90 147 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 OPTNQ96CV9 577 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 TMA16Q96EY4 203 aaKnown RBP1.25□□□□□ -2.21
TARDBP-208ENST00000477447 UPF3BQ9BZI7 483 aaKnown RBP1.25□□□□□ -2.21
TARDBP-208ENST00000477447 AICDAQ9GZX7 198 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 IMP3Q9NV31 184 aaKnown RBP1.25□□□□□ -2.21
TARDBP-208ENST00000477447 TAS2R9Q9NYW1 312 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 LINC00588Q9Y4M8 146 aa1.25□□□□□ -2.21
TARDBP-208ENST00000477447 ATRNO75882 1429 aa1.24□□□□□ -2.21
TARDBP-208ENST00000477447 A0A1B0GW15 77 aa1.24□□□□□ -2.21
TARDBP-208ENST00000477447 A0A1W2PRG6 482 aa1.24□□□□□ -2.21
TARDBP-208ENST00000477447 RNASEK-C17orf49H0YIS7 233 aa1.24□□□□□ -2.21
TARDBP-208ENST00000477447 MKRN2OSH3BPM6 223 aa1.24□□□□□ -2.21
TARDBP-208ENST00000477447 H3BQV1 296 aa1.24□□□□□ -2.21
TARDBP-208ENST00000477447 COCHO43405 550 aa1.24□□□□□ -2.21
TARDBP-208ENST00000477447 NSA2O95478 260 aaKnown RBP1.24□□□□□ -2.21
TARDBP-208ENST00000477447 CD40LGP29965 261 aa1.24□□□□□ -2.21
TARDBP-208ENST00000477447 CDC34P49427 236 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms