RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 NCBP2LA6PVI3 153 aaKnown RBP5.74□□□□□ -1.49
BRCA1-214ENST00000477152 FAM90A12PA8MX19 464 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 FAM90A5PA8MXJ8 464 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 LY6LH3BQJ8 138 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 J3QLW9 94 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 ZNF780AO75290 641 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-214ENST00000477152 MMP23AO75900 390 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 FADS2O95864 444 aaKnown RBP5.74□□□□□ -1.49
BRCA1-214ENST00000477152 IL1AP01583 271 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 FAM90A15PP0C7V4 464 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 FAM90A13PP0C7W8 464 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 FAM90A14PP0C7W9 464 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 FAM90A24PP0C7X0 464 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 ZNF19P17023 458 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 KIR3DL2P43630 455 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 RAB25P57735 213 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 ISL1P61371 349 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 PAX5Q02548 391 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 GPR176Q14439 515 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 KISS1Q15726 138 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 PNLIPRP3Q17RR3 467 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 Q3ZCU0 254 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 TCTEX1D4Q5JR98 221 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 SLC25A30Q5SVS4 291 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 ZNF691Q5VV52 312 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 ELP2Q6IA86 826 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 RNF144BQ7Z419 303 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 RDH10Q8IZV5 341 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 SYS1Q8N2H4 156 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 OR51T1Q8NGJ9 327 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 OR52M1Q8NGK5 317 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 OR56B4Q8NH76 319 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 OR5AK2Q8NH90 309 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 RFT1Q96AA3 541 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 EME1Q96AY2 570 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 RASL11BQ9BPW5 248 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 LIN7CQ9NUP9 197 aaKnown RBP5.74□□□□□ -1.49
BRCA1-214ENST00000477152 MYRFQ9Y2G1 1151 aa5.74□□□□□ -1.49
BRCA1-214ENST00000477152 CMYA5Q8N3K9 4069 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 IGKV1-9A0A0C4DH69 117 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 FAM172BPA6NC97 362 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 M0R129 80 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 IGHG2P01859 326 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 CALCBP10092 127 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 VDAC1P21796 283 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 HOXD3P31249 432 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-214ENST00000477152 INSL3P51460 131 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 SNRPGP62308 76 aaKnown RBP5.73□□□□□ -1.49
BRCA1-214ENST00000477152 PPP3R1P63098 170 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 ZNF85Q03923 595 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 ZNF816Q0VGE8 651 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-214ENST00000477152 MED21Q13503 144 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 Q6P435 159 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 OR2W3Q7Z3T1 314 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 MOB3BQ86TA1 216 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 SATL1Q86VE3 508 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 TGIF2LXQ8IUE1 241 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 STPG2Q8N412 459 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 DRAM1Q8N682 238 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 C5orf56Q8N8D9 126 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 OR5D18Q8NGL1 313 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 CNIH3Q8TBE1 160 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 NR1H4Q96RI1 486 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-214ENST00000477152 FAM192AQ9GZU8 254 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 METTL9Q9H1A3 318 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 DCLRE1BQ9H816 532 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 LINC00574Q9H8X3 128 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 IL36RNQ9UBH0 155 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 TRGV11A0A075B6L2 103 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 WI2-2373I1.2A0A1W2PRP0 233 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 TMEM30CPA0ZSE6 113 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 IRGMA1A4Y4 181 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 CCL24O00175 119 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 HSD17B6O14756 317 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 IGKV1D-33P01593 117 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 IGKV1-33P01594 117 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 FOXE3Q13461 319 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 GPR50Q13585 617 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 C17orf58Q2M2W7 97 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 TRAT1Q6PIZ9 186 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 ZNF329Q86UD4 541 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 PARP16Q8N5Y8 322 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 C8orf31Q8N9H6 132 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 NEK7Q8TDX7 302 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 TNFAIP8L1Q8WVP5 186 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 COQ2Q96H96 371 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 C4orf36Q96KX1 117 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 ALG8Q9BVK2 526 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 SPACA1Q9HBV2 294 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 KIF25Q9UIL4 384 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 ERGIC3Q9Y282 383 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 U3KQK5 164 aa5.73□□□□□ -1.49
BRCA1-214ENST00000477152 NOTCH3Q9UM47 2321 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 NPIPB11E5RHQ5 1161 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 H0YHG0 523 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 C3orf84H3BNL1 204 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 TRIAP1O43715 76 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 MOSP00540 346 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms