RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 Q6ZSV7 163 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 TMEM219Q86XT9 240 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 FAM89BQ8N5H3 189 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 KCNG3Q8TAE7 436 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 ARL11Q969Q4 196 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 CST11Q9H112 138 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 STEAP1Q9UHE8 339 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 VPREB3Q9UKI3 123 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 ELF5Q9UKW6 265 aaPredicted RBP10.02□□□□□ -0.81
APTX-220ENST00000476858 KCNK7Q9Y2U2 307 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 POMT1Q9Y6A1 747 aa10.02□□□□□ -0.81
APTX-220ENST00000476858 TNFAIP8O95379 198 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 MYL9P24844 172 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 COMPP49747 757 aaPredicted RBP10.01□□□□□ -0.81
APTX-220ENST00000476858 ZNF134P52741 427 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 LGALS4P56470 323 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 LSM3P62310 102 aaKnown RBP10.01□□□□□ -0.81
APTX-220ENST00000476858 RBM39Q14498 530 aaKnown RBP10.01□□□□□ -0.81
APTX-220ENST00000476858 HLA-DRB5Q30154 266 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 Q6ZS46 218 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 OR2W3Q7Z3T1 314 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 TMEM86BQ8N661 226 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 OR52L2PQ8NGH6 319 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 OR10V1Q8NGI7 309 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 ARHGAP5-AS1Q96IT6 56 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 PECRQ9BY49 303 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 PARP12Q9H0J9 701 aaKnown RBP10.01□□□□□ -0.81
APTX-220ENST00000476858 PCDHB16Q9NRJ7 776 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 AK3Q9UIJ7 227 aa10.01□□□□□ -0.81
APTX-220ENST00000476858 TBL2Q9Y4P3 447 aaKnown RBP10.01□□□□□ -0.81
APTX-220ENST00000476858 A0A087WXM4 84 aa10□□□□□ -0.81
APTX-220ENST00000476858 BUB1B-PAK6H3BSN5 160 aa10□□□□□ -0.81
APTX-220ENST00000476858 J3QR06 171 aa10□□□□□ -0.81
APTX-220ENST00000476858 HBZP02008 142 aa10□□□□□ -0.81
APTX-220ENST00000476858 GALP22466 123 aa10□□□□□ -0.81
APTX-220ENST00000476858 CFPP27918 469 aa10□□□□□ -0.81
APTX-220ENST00000476858 ZNF565Q8N9K5 539 aa10□□□□□ -0.81
APTX-220ENST00000476858 ZNF439Q8NDP4 499 aa10□□□□□ -0.81
APTX-220ENST00000476858 OR5H6Q8NGV6 325 aa10□□□□□ -0.81
APTX-220ENST00000476858 MALSU1Q96EH3 234 aa10□□□□□ -0.81
APTX-220ENST00000476858 NAA50Q9GZZ1 169 aaKnown RBP10□□□□□ -0.81
APTX-220ENST00000476858 ZMAT3Q9HA38 289 aaKnown RBP10□□□□□ -0.81
APTX-220ENST00000476858 LIN7BQ9HAP6 207 aa10□□□□□ -0.81
APTX-220ENST00000476858 TAF9BQ9HBM6 251 aa10□□□□□ -0.81
APTX-220ENST00000476858 SPACA1Q9HBV2 294 aa10□□□□□ -0.81
APTX-220ENST00000476858 MBNL3Q9NUK0 354 aaKnown RBP10□□□□□ -0.81
APTX-220ENST00000476858 TRAPPC2LQ9UL33 140 aa10□□□□□ -0.81
APTX-220ENST00000476858 SSR3Q9UNL2 185 aa10□□□□□ -0.81
APTX-220ENST00000476858 A6NDX4 124 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 VGLL3A8MV65 326 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 F2RL2O00254 374 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 SDCBPO00560 298 aaPredicted RBP9.99□□□□□ -0.81
APTX-220ENST00000476858 PDCD5O14737 125 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 NAPSAO96009 420 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 HTR1DP28221 377 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 RAG2P55895 527 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 HABP2Q14520 560 aaPredicted RBP9.99□□□□□ -0.81
APTX-220ENST00000476858 TPTE2P1Q5T6R2 138 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 OR52W1Q6IF63 320 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 C12orf54Q6X4T0 127 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 NEDD4LQ96PU5 975 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 MMP28Q9H239 520 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 DPAGT1Q9H3H5 408 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 GFOD1Q9NXC2 390 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 DPM3Q9P2X0 92 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 DAPK2Q9UIK4 370 aa9.99□□□□□ -0.81
APTX-220ENST00000476858 SH2D7A6NKC9 451 aaPredicted RBP9.98□□□□□ -0.81
APTX-220ENST00000476858 NOTOA8MTQ0 251 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 RAB27BO00194 218 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 TOR1AO14656 332 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 ORC5O43913 435 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 GNB3P16520 340 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 LORP23490 312 aaPredicted RBP9.98□□□□□ -0.81
APTX-220ENST00000476858 PPP1CCP36873 323 aaKnown RBP9.98□□□□□ -0.81
APTX-220ENST00000476858 REG1BP48304 166 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 CT45A1Q5HYN5 189 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 MINOS1Q5TGZ0 78 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 SFXN4Q6P4A7 337 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 ZNF880Q6PDB4 577 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 OR9G1Q8NH87 305 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 CT45A3Q8NHU0 189 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 LINC01006Q8NI28 216 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 LGALS14Q8TCE9 139 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 MAFIPQ8WZ33 124 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 PLEKHJ1Q9NW61 149 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 TCF19Q9Y242 345 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 MINOS1-NBL1R4GNA1 71 aa9.98□□□□□ -0.81
APTX-220ENST00000476858 A0A075B6Q4 140 aa9.97□□□□□ -0.81
APTX-220ENST00000476858 IGKV1-6A0A0C4DH72 117 aa9.97□□□□□ -0.81
APTX-220ENST00000476858 A0A1W2PPI3 338 aa9.97□□□□□ -0.81
APTX-220ENST00000476858 ZNF736B4DX44 427 aaPredicted RBP9.97□□□□□ -0.81
APTX-220ENST00000476858 NDUFA7O95182 113 aa9.97□□□□□ -0.81
APTX-220ENST00000476858 GLAP06280 429 aa9.97□□□□□ -0.81
APTX-220ENST00000476858 GZMHP20718 246 aa9.97□□□□□ -0.81
APTX-220ENST00000476858 NCS1P62166 190 aa9.97□□□□□ -0.81
APTX-220ENST00000476858 HMGN3Q15651 99 aa9.97□□□□□ -0.81
APTX-220ENST00000476858 SLC16A12Q6ZSM3 486 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms