RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 GON7Q9BXV9 100 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 GAL3ST2Q9H3Q3 398 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 ZNF286AQ9HBT8 521 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 CALYQ9NYX4 217 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 OR6C3Q9NZP0 311 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 STEAP1Q9UHE8 339 aa7.86□□□□□ -1.15
HDAC3-208ENST00000476739 LOC100506127A0A0U1RQW1 187 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM272A0A1B0GTI8 110 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM30CPA0ZSE6 113 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 IFITM5A6NNB3 132 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 FOXI3A8MTJ6 420 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-208ENST00000476739 MCRIP1C9JLW8 97 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 NPIPB11E5RHQ5 1161 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 H3BMQ9 156 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 C15orf65H3BRN8 121 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 AIPO00170 330 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 PDCD5O14737 125 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 BET1O15155 118 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 SOCS1O15524 211 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 PDCD6O75340 191 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 IL1AP01583 271 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 FBP1P09467 338 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 CLEC2LP0C7M8 214 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 CTRB1P17538 263 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 FUT3P21217 361 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 MYL9P24844 172 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 NFYBP25208 207 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 CHATP28329 748 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 CD40LGP29965 261 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 SDC2P34741 201 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 EFNB2P52799 333 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM50BP56557 158 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 PLA1AQ53H76 456 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 CTRB2Q6GPI1 263 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 Q6ZPA2 131 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 OR2W3Q7Z3T1 314 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 GAPTQ8N292 157 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 ABHD12Q8N2K0 398 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 ZNF565Q8N9K5 539 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 BEND2Q8NDZ0 799 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 OR4P4Q8NGL7 312 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 YIPF6Q96EC8 236 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 FAAP24Q9BTP7 215 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 CLEC7AQ9BXN2 247 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 MEGF9Q9H1U4 602 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 LINC00574Q9H8X3 128 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 SPACA1Q9HBV2 294 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 IDI2-AS1Q9NZ38 188 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 SSR3Q9UNL2 185 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 COL6A5A8TX70 2615 aa7.85□□□□□ -1.15
HDAC3-208ENST00000476739 A0A087X0M5 115 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 IGHV3-43A0A0B4J1X8 118 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 A0A1B0GX30 115 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM89A2RUT3 159 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 FAM181BA6NEQ2 426 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 H3BUX3 64 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 PAHP00439 452 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 TRAPPC2P0DI81 140 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 TRAPPC2BP0DI82 140 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 IGHV3-43DP0DP04 118 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 RCC1P18754 421 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-208ENST00000476739 CFPP27918 469 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 BLVRBP30043 206 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-208ENST00000476739 VEGFCP49767 419 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 RAB13P51153 203 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 LGALS4P56470 323 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 ACTG1P63261 375 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 RELBQ01201 579 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 MXD1Q05195 221 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 RBM39Q14498 530 aaKnown RBP7.84□□□□□ -1.15
HDAC3-208ENST00000476739 SSX2Q16385 188 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 MOGAT2Q3SYC2 334 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 OLFML2AQ68BL7 652 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 FAM122CQ6P4D5 195 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 CCDC28AQ8IWP9 274 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 CADM3Q8N126 398 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 FAM89BQ8N5H3 189 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 TMEM86BQ8N661 226 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 MRPL30Q8TCC3 161 aaKnown RBP7.84□□□□□ -1.15
HDAC3-208ENST00000476739 PIFOQ8TCI5 191 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 SSMEM1Q8WWF3 244 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 NEDD4LQ96PU5 975 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 SSX3Q99909 188 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 LIN7BQ9HAP6 207 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 FBLN5Q9UBX5 448 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 HILPDAQ9Y5L2 63 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 POMT1Q9Y6A1 747 aa7.84□□□□□ -1.15
HDAC3-208ENST00000476739 A0A1W2PPE3 182 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 C12orf77C9JDV5 145 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 GPR137BO60478 399 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 PTTG1O95997 202 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 IGLV1-47P01700 117 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 GLAP06280 429 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 HKR1P10072 659 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 GZMHP20718 246 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 CD34P28906 385 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 AP2S1P53680 142 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-208ENST00000476739 LSM3P62310 102 aaKnown RBP7.83□□□□□ -1.16
HDAC3-208ENST00000476739 LY6EQ16553 131 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 LRRC75BQ2VPJ9 315 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms