RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ZNF439Q8NDP4 499 aa12.63□□□□□ -0.39
APOBEC3F-203ENST00000476513 PXT1Q8NFP0 134 aa12.63□□□□□ -0.39
APOBEC3F-203ENST00000476513 OR10K1Q8NGX5 313 aa12.63□□□□□ -0.39
APOBEC3F-203ENST00000476513 IL17DQ8TAD2 202 aa12.63□□□□□ -0.39
APOBEC3F-203ENST00000476513 TMEM30CPA0ZSE6 113 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 SULT1B1O43704 296 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 SOX15O60248 233 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 IGLV1-51P01701 117 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 CNTFRP26992 372 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 CCR9P51686 369 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 ZNF134P52741 427 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 LSAMPQ13449 338 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 Q3ZCU0 254 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 C19orf54Q5BKX5 351 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 LPCAT4Q643R3 524 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 CASTOR1Q8WTX7 329 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 CCDC107Q8WV48 283 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 NSL1Q96IY1 281 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 RITA1Q96K30 269 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 STUB1Q9UNE7 303 aa12.62□□□□□ -0.39
APOBEC3F-203ENST00000476513 TNCP24821 2201 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 OR4C45A6NMZ5 311 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 ORC5O43913 435 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 HTR1AP08908 422 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 CT45A1Q5HYN5 189 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 OR5D14Q8NGL3 314 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 CT45A3Q8NHU0 189 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 ANKRD60Q9BZ19 345 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 HERC2O95714 4834 aa12.61□□□□□ -0.39
APOBEC3F-203ENST00000476513 A0A1W2PN81 502 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 GABRPO00591 440 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 HSPB1P04792 205 aaKnown RBP12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 CHRNA7P36544 502 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 ACTBP60709 375 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 RSU1Q15404 277 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 ECSCRQ19T08 205 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 C5orf64Q2M2E5 130 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 KCTD20Q7Z5Y7 419 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 ANKRD13BQ86YJ7 626 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 SERPINA12Q8IW75 414 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 TNFAIP8L1Q8WVP5 186 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 FLYWCH2Q96CP2 140 aaKnown RBP12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 RSRP1Q9BUV0 290 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 IFT22Q9H7X7 185 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 RETNQ9HD89 108 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 FBXO7Q9Y3I1 522 aa12.6□□□□□ -0.39
APOBEC3F-203ENST00000476513 SLC16A6O15403 523 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 LANCL1O43813 399 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 OR7C1O76099 320 aaPredicted RBP12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 HTR3BO95264 441 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 IGHV3-11P01762 117 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 NDPQ00604 133 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 TMED1Q13445 227 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 LIN54Q6MZP7 749 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 ASCL4Q6XD76 172 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 SPATA24Q86W54 205 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 PARP16Q8N5Y8 322 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 OR10V1Q8NGI7 309 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 ZNF251Q9BRH9 671 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 GNG12Q9UBI6 72 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 FOXA2Q9Y261 457 aaPredicted RBP12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 ST3GAL6Q9Y274 331 aa12.59□□□□□ -0.39
APOBEC3F-203ENST00000476513 RBMY1BA6NDE4 496 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 RBMY1EA6NEQ0 496 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 C12orf77C9JDV5 145 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 NBR2O15453 112 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 MT-ND4P03905 459 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 RBMY1DP0C7P1 496 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 RBM11P57052 281 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 ALKBH1Q13686 389 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 KDM4DQ6B0I6 523 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 SATL1Q86VE3 508 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 PELI1Q96FA3 418 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 GPER1Q99527 375 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 THTPAQ9BU02 230 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 FAM192AQ9GZU8 254 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 TUBA4BQ9H853 241 aa12.58□□□□□ -0.4
APOBEC3F-203ENST00000476513 TCRBV3S1A0A5B6 114 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 AIPO00170 330 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 GEMIN2O14893 280 aaKnown RBP12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 CDRT1O95170 752 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 T-ENOLP0DO92 83 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 NHLRC3Q5JS37 347 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 ZNF497Q6ZNH5 498 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 NPBQ8NG41 125 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 OR51A2Q8NGJ7 313 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 OR8J1Q8NGP2 316 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 RFKQ969G6 155 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 FAM110AQ9BQ89 295 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 TMED9Q9BVK6 235 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 MRPL20Q9BYC9 149 aaKnown RBP12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 CST11Q9H112 138 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 ERGIC3Q9Y282 383 aa12.57□□□□□ -0.4
APOBEC3F-203ENST00000476513 DAPL1A0PJW8 107 aa12.56□□□□□ -0.4
APOBEC3F-203ENST00000476513 J3QLW9 94 aa12.56□□□□□ -0.4
APOBEC3F-203ENST00000476513 J3QRE1 110 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms