RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 QDPRP09417 244 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 UBBP0CG47 229 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 UBCP0CG48 685 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SLC2A1P11166 492 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 GNB3P16520 340 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 AKR1C4P17516 323 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 M6PRP20645 277 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ZP3P21754 424 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 MSR1P21757 451 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 GCH1P30793 250 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 CDAP32320 146 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 COMPP49747 757 aaPredicted RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ATP1B3P54709 279 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 RPS27AP62979 156 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 UBA52P62987 128 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 GLO1Q04760 184 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SCRN3Q0VDG4 424 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ZMYND11Q15326 602 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 HFEQ30201 348 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF718Q3SXZ3 478 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF260Q3ZCT1 412 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 RNASE10Q5GAN6 216 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 TEX30Q5JUR7 227 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 LY6G6FQ5SQ64 297 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 PHYHD1Q5SRE7 291 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 C1orf100Q5SVJ3 147 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 THEM4Q5T1C6 240 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 TMEM244Q5VVB8 128 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 OR52W1Q6IF63 320 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 CFAP77Q6ZQR2 320 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 FOXL2NBQ6ZUU3 175 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 C1QL2Q7Z5L3 287 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 LYG2Q86SG7 212 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF546Q86UE3 836 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF101Q8IZC7 436 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 STPG2Q8N412 459 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 BOLLQ8N9W6 283 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SPERTQ8NA61 448 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ADAD2Q8NCV1 583 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 PXT1Q8NFP0 134 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SEMA6DQ8NFY4 1073 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SLC26A10Q8NG04 563 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 OR13C8Q8NGS7 320 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 CLDND2Q8NHS1 167 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ST7LQ8TDW4 575 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 RAB1CQ92928 201 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 MRPS24Q96EL2 167 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ADAT3Q96EY9 351 aaPredicted RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 FAM71F1Q96KD3 344 aaPredicted RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SPACA5Q96QH8 159 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SLC25A21Q9BQT8 299 aaPredicted RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 AIFM2Q9BRQ8 373 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF471Q9BX82 626 aaPredicted RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 MRPL13Q9BYD1 178 aaKnown RBP3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SELENOIQ9C0D9 397 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 PBOV1Q9GZY1 135 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 BANF2Q9H503 90 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF665Q9H7R5 613 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SCPEP1Q9HB40 452 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 C12orf4Q9NQ89 552 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 IFT46Q9NQC8 304 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 DECR2Q9NUI1 292 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 HIF1ANQ9NWT6 349 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 FAM206AQ9NX38 181 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 COMMD9Q9P000 198 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 RAB22AQ9UL26 194 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 SLC45A2Q9UMX9 530 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 RHBDD3Q9Y3P4 386 aa3.54□□□□□ -1.84
VPS13D-206ENST00000476045 A0A0A6YYD4 124 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 A0A1B0GTI1 187 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 LOC102723971A0A1B0GUV8 181 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 KANTRA0A1W2PQU2 76 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 C9orf170A2RU37 121 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 LRP5LA4QPB2 252 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 C5orf63A6NC05 138 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 METTL21EPA6NDL7 271 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 C5orf51A6NDU8 294 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR5H14A6NHG9 310 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 A6NLC8 198 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR2AT4A6NND4 320 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF785A8K8V0 405 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 A8MXK9 166 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 FAM157AC9JC47 383 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 F5H0A9 414 aaPredicted RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 TRIM77I1YAP6 450 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 MPPED1O15442 326 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 KCNAB3O43448 404 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 BCL2L11O43521 198 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SSX5O60225 188 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 RBMXL2O75526 392 aaKnown RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 FOXH1O75593 365 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SNAPC5O75971 98 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 IGHV2-5P01817 119 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 HLA-AP01891 365 aaKnown RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 TTRP02766 147 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 CD74P04233 296 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 IFNA6P05013 189 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 FGF2P09038 288 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 CD37P11049 281 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SLC25A4P12235 298 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms