RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 IGHV3-49A0A0A0MS15 119 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 TEX50A0A1B0GTY4 177 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 A8MWL6 223 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 ARL6IP5O75915 188 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 RNASE2P10153 161 aaKnown RBP3.21□□□□□ -1.9
SMC5-203ENST00000475540 NUDT2P50583 147 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 TAS2R43P59537 309 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 ATP5G2Q06055 141 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 SRSF6Q13247 344 aaKnown RBP3.21□□□□□ -1.9
SMC5-203ENST00000475540 DNLZQ5SXM8 178 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 CLVS2Q5SYC1 327 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 SAXO2Q658L1 398 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 MORN3Q6PF18 240 aaPredicted RBP3.21□□□□□ -1.9
SMC5-203ENST00000475540 RASSF6Q6ZTQ3 369 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 WDR86Q86TI4 376 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 SLC51BQ86UW2 128 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 COMMD7Q86VX2 200 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 SLC35G3Q8N808 338 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 ZNF555Q8NEP9 628 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 GPR32P1Q8NGA4 272 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 OR5H2Q8NGV7 314 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 OR5K1Q8NHB7 308 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 FXYD5Q96DB9 178 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 RBMXL1Q96E39 390 aaKnown RBP3.21□□□□□ -1.9
SMC5-203ENST00000475540 TBL1YQ9BQ87 522 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 ULBP1Q9BZM6 244 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 CA10Q9NS85 328 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 PARVAQ9NVD7 372 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 TMEM216Q9P0N5 145 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 POLR1DQ9Y2S0 133 aa3.21□□□□□ -1.9
SMC5-203ENST00000475540 ADGRL3Q9HAR2 1447 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 DYSFO75923 2080 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 TMEM250H0YL14 139 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 MFNGO00587 321 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 IGLV3-25P01717 112 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 HLA-DRAP01903 254 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 IL1RNP18510 177 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 GADD45AP24522 165 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 CAPZBP47756 277 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 CXCL12P48061 93 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 SULT1A1P50225 295 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 SULT1A2P50226 295 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 GDI2P50395 445 aaKnown RBP3.2□□□□□ -1.9
SMC5-203ENST00000475540 TCL1AP56279 114 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 MP68P56378 58 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 CXCR4P61073 352 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 SLC35A2P78381 396 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 SPA17Q15506 151 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 HIST3H3Q16695 136 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 CENPWQ5EE01 88 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 SPIN3Q5JUX0 258 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 VN1R4Q7Z5H5 301 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 NATD1Q8N6N6 113 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 ZDHHC22Q8N966 263 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 OR8A1Q8NGG7 326 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 OR11L1Q8NGX0 322 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 OR10D3Q8NH80 312 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 PHOSPHO2Q8TCD6 241 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 TMBIM1Q969X1 311 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 IMP4Q96G21 291 aaKnown RBP3.2□□□□□ -1.9
SMC5-203ENST00000475540 PRAP1Q96NZ9 151 aa3.2□□□□□ -1.9
SMC5-203ENST00000475540 LSM5Q9Y4Y9 91 aaKnown RBP3.2□□□□□ -1.9
SMC5-203ENST00000475540 ZNF706Q9Y5V0 76 aaPredicted RBP3.2□□□□□ -1.9
SMC5-203ENST00000475540 K7EPK0 472 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 RGS5O15539 181 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 HBZP02008 142 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 TNNC2P02585 160 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 IL6P05231 212 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 IGKV4-1P06312 121 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 IL3P08700 152 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 C1GALT1C1LP0DN25 315 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 NELFEP18615 380 aaKnown RBP3.19□□□□□ -1.9
SMC5-203ENST00000475540 SLC6A1P30531 599 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 OR4D2P58180 307 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 DAD1P61803 113 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 OR2F1Q13607 317 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 EBPQ15125 230 aaKnown RBP3.19□□□□□ -1.9
SMC5-203ENST00000475540 C1orf195Q5TG92 126 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 FAM222AQ5U5X8 452 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 CALHM3Q86XJ0 350 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 GID4Q8IVV7 300 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 MFSD8Q8NHS3 518 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 TNFAIP8L1Q8WVP5 186 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 TMA16Q96EY4 203 aaKnown RBP3.19□□□□□ -1.9
SMC5-203ENST00000475540 DERL3Q96Q80 235 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 THTPAQ9BU02 230 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 ZNF436Q9C0F3 470 aaPredicted RBP3.19□□□□□ -1.9
SMC5-203ENST00000475540 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.19□□□□□ -1.9
SMC5-203ENST00000475540 TAS2R5Q9NYW4 299 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 DKKL1Q9UK85 242 aa3.19□□□□□ -1.9
SMC5-203ENST00000475540 DNMT1P26358 1616 aaKnown RBP3.19□□□□□ -1.9
SMC5-203ENST00000475540 IGKV1-6A0A0C4DH72 117 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 CENPVL3A0A0U1RRI6 287 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 KPNA3O00505 521 aaPredicted RBP3.18□□□□□ -1.9
SMC5-203ENST00000475540 COPEO14579 308 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 IGKV1-39P01597 117 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 IGKV1D-39P04432 117 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 CRYBA1P05813 215 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 SEC11BP0C7V7 166 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 GABRA1P14867 456 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms