RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 LINC00311Q8N616 119 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 TMEM104Q8NE00 496 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 OR52M1Q8NGK5 317 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 OR52I1Q8NGK6 324 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 OR5M8Q8NGP6 311 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 OR52N1Q8NH53 320 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 RHOXF1Q8NHV9 184 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 RTN4IP1Q8WWV3 396 aaPredicted RBP11.26□□□□□ -0.61
COL2A1-205ENST00000474996 PRR25Q96S07 402 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 GON7Q9BXV9 100 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 METTL9Q9H1A3 318 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 PLSCR3Q9NRY6 295 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 GFOD1Q9NXC2 390 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 IL36GQ9NZH8 169 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 LSM4Q9Y4Z0 139 aaKnown RBP11.26□□□□□ -0.61
COL2A1-205ENST00000474996 U3KQK5 164 aa11.26□□□□□ -0.61
COL2A1-205ENST00000474996 ZNF736B4DX44 427 aaPredicted RBP11.25□□□□□ -0.61
COL2A1-205ENST00000474996 MOSP00540 346 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 CD2P06729 351 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 IL3RAP26951 378 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 CD1BP29016 333 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 ZNF93P35789 620 aaPredicted RBP11.25□□□□□ -0.61
COL2A1-205ENST00000474996 FOXE3Q13461 319 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 KIR2DS1Q14954 304 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 ATAD3CQ5T2N8 411 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 DDI2Q5TDH0 399 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 XAF1Q6GPH4 301 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 RNF152Q8N8N0 203 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 GPR148Q8TDV2 347 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 NEK7Q8TDX7 302 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 ST6GALNAC6Q969X2 333 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 TMEM106AQ96A25 262 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 Q96MT0 163 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 S1PR3Q99500 378 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 RASL11BQ9BPW5 248 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 TMEM138Q9NPI0 162 aa11.25□□□□□ -0.61
COL2A1-205ENST00000474996 A0A1W2PP11 408 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 AIPO00170 330 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 SLC31A2O15432 143 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 ORC5O43913 435 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 ELANEP08246 267 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 LIMS3P0CW19 117 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 LIMS4P0CW20 117 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 ECI1P42126 302 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 PPP3R1P63098 170 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 CFHR3Q02985 330 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 MPV17LQ2QL34 196 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 KLHL22Q53GT1 634 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 NKAPLQ5M9Q1 402 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 LINC00596Q86U02 117 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 C8orf31Q8N9H6 132 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 APH1BQ8WW43 257 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 ORAI1Q96D31 301 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 CNBD2Q96M20 576 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 S100A13Q99584 98 aa11.24□□□□□ -0.61
COL2A1-205ENST00000474996 MRPS18AQ9NVS2 196 aaKnown RBP11.24□□□□□ -0.61
COL2A1-205ENST00000474996 RPL36Q9Y3U8 105 aaKnown RBP11.24□□□□□ -0.61
COL2A1-205ENST00000474996 SEC14L6B5MCN3 397 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 WBP4O75554 376 aaKnown RBP11.23□□□□□ -0.61
COL2A1-205ENST00000474996 IGHG4P01861 327 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 MT-ND4P03905 459 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 VDAC1P21796 283 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 F2RL1P55085 397 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 SLC22A6Q4U2R8 563 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 RPL22L1Q6P5R6 122 aaKnown RBP11.23□□□□□ -0.61
COL2A1-205ENST00000474996 ZNF497Q6ZNH5 498 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 FAM71E2Q8N5Q1 922 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 ASCL2Q99929 193 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 YTHDF1Q9BYJ9 559 aaKnown RBP11.23□□□□□ -0.61
COL2A1-205ENST00000474996 PAK1IP1Q9NWT1 392 aaPredicted RBP11.23□□□□□ -0.61
COL2A1-205ENST00000474996 SCOCQ9UIL1 159 aa11.23□□□□□ -0.61
COL2A1-205ENST00000474996 C12orf77C9JDV5 145 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 GTF2F2P13984 249 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 BDKRB2P30411 391 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 SOX6P35712 828 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 ZNF134P52741 427 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 KCTD21Q4G0X4 260 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 CCDC58Q4VC31 144 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 OR2G6Q5TZ20 316 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 SLC25A48Q6ZT89 311 aaKnown RBP11.22□□□□□ -0.61
COL2A1-205ENST00000474996 STX19Q8N4C7 294 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 ZNF439Q8NDP4 499 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 OR8H1Q8NGG4 311 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 OR10V1Q8NGI7 309 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 C4orf3Q8WVX3 66 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 KCTD7Q96MP8 289 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 PLCXD1Q9NUJ7 323 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 GNG12Q9UBI6 72 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 TRAPPC2LQ9UL33 140 aa11.22□□□□□ -0.61
COL2A1-205ENST00000474996 SIRT4Q9Y6E7 314 aaPredicted RBP11.22□□□□□ -0.61
COL2A1-205ENST00000474996 MAGEA13PA6NCF6 341 aa11.21□□□□□ -0.61
COL2A1-205ENST00000474996 SPINT2O43291 252 aa11.21□□□□□ -0.61
COL2A1-205ENST00000474996 TXNL1O43396 289 aa11.21□□□□□ -0.61
COL2A1-205ENST00000474996 ZNF780AO75290 641 aaPredicted RBP11.21□□□□□ -0.61
COL2A1-205ENST00000474996 SLC2A2P11168 524 aaPredicted RBP11.21□□□□□ -0.61
COL2A1-205ENST00000474996 PSMB8P28062 276 aa11.21□□□□□ -0.61
COL2A1-205ENST00000474996 ETV1P50549 477 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms