RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 MRPL48Q96GC5 212 aaKnown RBP10.96□□□□□ -0.65
CCDC78-209ENST00000474647 MYCBPQ99417 103 aaPredicted RBP10.96□□□□□ -0.65
CCDC78-209ENST00000474647 GPER1Q99527 375 aa10.96□□□□□ -0.65
CCDC78-209ENST00000474647 LYSTQ99698 3801 aa10.96□□□□□ -0.65
CCDC78-209ENST00000474647 ALG8Q9BVK2 526 aa10.96□□□□□ -0.65
CCDC78-209ENST00000474647 SCOCQ9UIL1 159 aa10.96□□□□□ -0.65
CCDC78-209ENST00000474647 NPIPB11E5RHQ5 1161 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 MRPS14O60783 128 aaKnown RBP10.95□□□□□ -0.66
CCDC78-209ENST00000474647 ELANEP08246 267 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 CHATP28329 748 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 CCR9P51686 369 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 ALKBH1Q13686 389 aaKnown RBP10.95□□□□□ -0.66
CCDC78-209ENST00000474647 IRF3Q14653 427 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 FDX2Q6P4F2 183 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 KCTD20Q7Z5Y7 419 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 SYS1Q8N2H4 156 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 OR11H1Q8NG94 326 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 OR10A7Q8NGE5 316 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 UBALD1Q8TB05 177 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 TNFAIP8L1Q8WVP5 186 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 C4orf3Q8WVX3 66 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 TSEN15Q8WW01 171 aaKnown RBP10.95□□□□□ -0.66
CCDC78-209ENST00000474647 C4orf36Q96KX1 117 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 RASL11BQ9BPW5 248 aa10.95□□□□□ -0.66
CCDC78-209ENST00000474647 CHCHD3Q9NX63 227 aaKnown RBP10.95□□□□□ -0.66
CCDC78-209ENST00000474647 SIRT4Q9Y6E7 314 aaPredicted RBP10.95□□□□□ -0.66
CCDC78-209ENST00000474647 IGHV3-43A0A0B4J1X8 118 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 OR4C45A6NMZ5 311 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 SDCBPO00560 298 aaPredicted RBP10.94□□□□□ -0.66
CCDC78-209ENST00000474647 GABRPO00591 440 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 HTR3BO95264 441 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 IGHV3-43DP0DP04 118 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 EBI3Q14213 229 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 IL13RA2Q14627 380 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 RSU1Q15404 277 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 SLC16A12Q6ZSM3 486 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 SERPINA12Q8IW75 414 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 Q8N6K4 173 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 OR5D14Q8NGL3 314 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 OR52N1Q8NH53 320 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 RBMXL1Q96E39 390 aaKnown RBP10.94□□□□□ -0.66
CCDC78-209ENST00000474647 PELI1Q96FA3 418 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 CPNE2Q96FN4 548 aaPredicted RBP10.94□□□□□ -0.66
CCDC78-209ENST00000474647 RCHY1Q96PM5 261 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 HSPB9Q9BQS6 159 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 NCOR1P1Q9H4R4 102 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 LINC00574Q9H8X3 128 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 CLEC2DQ9UHP7 191 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 DHDHQ9UQ10 334 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 SMAD5-AS1Q9Y6J3 95 aa10.94□□□□□ -0.66
CCDC78-209ENST00000474647 MYL12BO14950 172 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 MAGEB3O15480 346 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 MOSP00540 346 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 IL3RAP26951 378 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 KCNJ3P48549 501 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 TBCEQ15813 527 aaPredicted RBP10.93□□□□□ -0.66
CCDC78-209ENST00000474647 ELP2Q6IA86 826 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 ZNF773Q6PK81 442 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 TMPRSS11AQ6ZMR5 421 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 NANOGP1Q8N7R0 232 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 SUMF2Q8NBJ7 301 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 ZNF485Q8NCK3 441 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 PXT1Q8NFP0 134 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 RTN4IP1Q8WWV3 396 aaPredicted RBP10.93□□□□□ -0.66
CCDC78-209ENST00000474647 S1PR3Q99500 378 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 DPCDQ9BVM2 203 aaPredicted RBP10.93□□□□□ -0.66
CCDC78-209ENST00000474647 MND1Q9BWT6 205 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 CCDC90BQ9GZT6 254 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 ISG20L2Q9H9L3 353 aaKnown RBP10.93□□□□□ -0.66
CCDC78-209ENST00000474647 PALMDQ9NP74 551 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 GAR1Q9NY12 217 aaKnown RBP10.93□□□□□ -0.66
CCDC78-209ENST00000474647 ZNF581Q9P0T4 197 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 ERGIC3Q9Y282 383 aa10.93□□□□□ -0.66
CCDC78-209ENST00000474647 LSM2Q9Y333 95 aaKnown RBP10.93□□□□□ -0.66
CCDC78-209ENST00000474647 CSMD3Q7Z407 3707 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
CCDC78-209ENST00000474647 ZNF736B4DX44 427 aaPredicted RBP10.92□□□□□ -0.66
CCDC78-209ENST00000474647 OR7C1O76099 320 aaPredicted RBP10.92□□□□□ -0.66
CCDC78-209ENST00000474647 IGHG4P01861 327 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 SLC2A2P11168 524 aaPredicted RBP10.92□□□□□ -0.66
CCDC78-209ENST00000474647 RAB3AP20336 220 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 SOX6P35712 828 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 WNT4P56705 351 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 CFHR3Q02985 330 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 MRPL28Q13084 256 aaKnown RBP10.92□□□□□ -0.66
CCDC78-209ENST00000474647 FHL3Q13643 280 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 OR2G6Q5TZ20 316 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 FAM53AQ6NSI3 398 aaPredicted RBP10.92□□□□□ -0.66
CCDC78-209ENST00000474647 OVCH2Q7RTZ1 564 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 SVOPQ8N4V2 548 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 PARP16Q8N5Y8 322 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 OR5AK2Q8NH90 309 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 NEK7Q8TDX7 302 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 CCDC107Q8WV48 283 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 ARL11Q969Q4 196 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 KCTD7Q96MP8 289 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 OR5B12Q96R08 314 aa10.92□□□□□ -0.66
CCDC78-209ENST00000474647 TMEM30CPA0ZSE6 113 aa10.91□□□□□ -0.66
CCDC78-209ENST00000474647 CDRT1O95170 752 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms