RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 LSM5Q9Y4Y9 91 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF780BQ9Y6R6 833 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 HELZP42694 1942 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 TICRRQ7Z2Z1 1910 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 NSG1A0A0A6YYJ2 146 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 EDDM13A0A1B0GTR0 161 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 HS3ST1O14792 307 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 CGAP01215 116 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 LAMP2P13473 410 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 IL11P20809 199 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 ATP6V0CP27449 155 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 SSTR5P35346 364 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 RBMXP38159 391 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 P2RY2P41231 377 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 GPM6AP51674 278 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 PFN3P60673 137 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 RUNX1Q01196 453 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 MFGE8Q08431 387 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 SRSF7Q16629 238 aaKnown RBP eCLIP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 PCK2Q16822 640 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 ACSF3Q4G176 576 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 SPIN3Q5JUX0 258 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 WBP2NLQ6ICG8 309 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 INO80CQ6PI98 192 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM184AQ6ZMB5 413 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 FAM58AQ8N1B3 248 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 ZFP62Q8NB50 900 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 NECAP1Q8NC96 275 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 OR5A1Q8NGJ0 315 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 OR2AE1Q8NHA4 323 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 RNF133Q8WVZ7 376 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF764Q96H86 408 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 ADOQ96SZ5 270 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 SMIM7Q9BQ49 75 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 LRRC61Q9BV99 259 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 TTTY10Q9BZA0 68 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 YAE1D1Q9NRH1 226 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 MRPL16Q9NX20 251 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 EHFQ9NZC4 300 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 AHSPQ9NZD4 102 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 HS3ST4Q9Y661 456 aa4.4□□□□□ -1.71
TMEM39A-206ENST00000473684 GREB1Q4ZG55 1949 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 NUP210LQ5VU65 1888 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 A0A1W2PPV4 95 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 A0A1W2PR80 420 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM189A5PLL7 270 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 DPRXA6NFQ7 191 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 RAB29O14966 203 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 RAMP2O60895 175 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 PITX3O75364 302 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 SERF1AO75920 110 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 KBTBD11O94819 623 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 VENTXO95231 258 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 GPX1P07203 203 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 IL3RAP26951 378 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 CDKN2AP42771 156 aaKnown RBP4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 ARF3P61204 181 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 AESQ08117 197 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 SPATA46Q5T0L3 261 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 BVES-AS1Q5T3Y7 98 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 SLC18B1Q6NT16 456 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 C19orf35Q6ZS72 473 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF550Q7Z398 422 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 MOGAT3Q86VF5 341 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 CADM4Q8NFZ8 388 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 OR10P1Q8NGE3 313 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 OR6N2Q8NGY6 317 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM255BQ8WV15 326 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 HARBI1Q96MB7 349 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 RAB1BQ9H0U4 201 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM30AQ9NV96 361 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 HCFC1R1Q9NWW0 138 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 SERTAD3Q9UJW9 196 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 TRAPPC2LQ9UL33 140 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 TRAV9-2A0A087WT02 112 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 TRBV5-4A0A0C4DH59 114 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 MED19A0JLT2 244 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 GAGE12HA6NDE8 117 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 SLC17A3O00476 420 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 CRISP2P16562 243 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 CORO1AP31146 461 aaKnown RBP4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 SLC6A6P31641 620 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 SFTPDP35247 375 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 ZP4Q12836 540 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 ACKR1Q16570 336 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 DCAF4L1Q3SXM0 396 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 FIGLAQ6QHK4 219 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF562Q6V9R5 426 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 LINC01555Q8NAE3 123 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 EMG1Q92979 244 aaKnown RBP4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 IGSF8Q969P0 613 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 MCHR1Q99705 422 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 CALHM2Q9HA72 323 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 GNG13Q9P2W3 67 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 TP53TG3Q9ULZ0 132 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 ANAPC10Q9UM13 185 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 PSG8Q9UQ74 426 aa4.39□□□□□ -1.71
TMEM39A-206ENST00000473684 MRPS17Q9Y2R5 130 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms