RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ZFP57Q9NU63 452 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 PLCXD1Q9NUJ7 323 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 PSORS1C1Q9UIG5 152 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 FAM90A10PA6NDY2 464 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 FAM90A7PA6NKC0 464 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 LINC01548A6NM66 108 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 SERPINE3A8MV23 424 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 FAM90A23PA8MXZ1 464 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 C12orf77C9JDV5 145 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 MAS1P04201 325 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 GNAO1P09471 354 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 CD1BP29016 333 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 CAPGP40121 348 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 REG1BP48304 166 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 ZNF134P52741 427 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 RPL23AP62750 156 aaKnown RBP12.07□□□□□ -0.48
VTI1A-203ENST00000472892 DOC2BQ14184 412 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 SYT6Q5T7P8 510 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-203ENST00000472892 RAB12Q6IQ22 244 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 TGIF2LXQ8IUE1 241 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 C8orf59Q8N0T1 100 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-203ENST00000472892 COMMD1Q8N668 190 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 LINC00482Q8N8I6 264 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 ZNF439Q8NDP4 499 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 TMEM104Q8NE00 496 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 OR2T10Q8NGZ9 312 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 RTN4IP1Q8WWV3 396 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-203ENST00000472892 PLSCR3Q9NRY6 295 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 ETAA1Q9NY74 926 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 TRAPPC2LQ9UL33 140 aa12.07□□□□□ -0.48
VTI1A-203ENST00000472892 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 IGHV3-72A0A0B4J1Y9 119 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 CA11O75493 328 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 SC5DO75845 299 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 GLAP06280 429 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 CELP19835 753 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 IL3RAP26951 378 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 SLC6A1P30531 599 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 ZNF137PP52743 207 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 RCN1Q15293 331 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 TMEM30BQ3MIR4 351 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 C6orf183Q5T699 404 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 STEAP3Q658P3 488 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 AWAT2Q6E213 333 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 ETV3LQ6ZN32 361 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 SLC25A48Q6ZT89 311 aaKnown RBP12.06□□□□□ -0.48
VTI1A-203ENST00000472892 OR2W3Q7Z3T1 314 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 FOXRED2Q8IWF2 684 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 MRPL41Q8IXM3 137 aaKnown RBP12.06□□□□□ -0.48
VTI1A-203ENST00000472892 STPG2Q8N412 459 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 NANOGP1Q8N7R0 232 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 Q8N9W7 124 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 OR51D1Q8NGF3 324 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 OR4K15Q8NH41 348 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 SELENOIQ9C0D9 397 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 ABCG5Q9H222 651 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 BANF2Q9H503 90 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 RAB9BQ9NP90 201 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 LIN7CQ9NUP9 197 aaKnown RBP12.06□□□□□ -0.48
VTI1A-203ENST00000472892 LINC00527Q9UJ94 153 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 PEX16Q9Y5Y5 336 aa12.06□□□□□ -0.48
VTI1A-203ENST00000472892 PNMA8CA0A1B0GUJ8 204 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 NCBP2LA6PVI3 153 aaKnown RBP12.05□□□□□ -0.48
VTI1A-203ENST00000472892 SLC31A2O15432 143 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 SPINT2O43291 252 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 MPIG6BO95866 241 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 MGMTP16455 207 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 FUT3P21217 361 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 VHLP40337 213 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 THBS3P49746 956 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 WNT4P56705 351 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 KRTAP10-11P60412 298 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 SLC35B1P78383 322 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 EGFEM1PQ0D2K5 195 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 CT45A1Q5HYN5 189 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 OGFRL1Q5TC84 451 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-203ENST00000472892 SIGIRRQ6IA17 410 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 AHSA2Q719I0 299 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 NKAIN3Q8N8D7 197 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 CT45A3Q8NHU0 189 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 UQCC2Q9BRT2 126 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 FKBP14Q9NWM8 211 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 GNG12Q9UBI6 72 aa12.05□□□□□ -0.48
VTI1A-203ENST00000472892 ZNF736B4DX44 427 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-203ENST00000472892 K7EIL1 84 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 MYL12BO14950 172 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 CASQ2O14958 399 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-203ENST00000472892 TXNL1O43396 289 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 CRTAPO75718 401 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-203ENST00000472892 MOSP00540 346 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 HBZP02008 142 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 RCC1P18754 421 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-203ENST00000472892 MYCNOSP40205 109 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 GPR12P47775 334 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 TRAT1Q6PIZ9 186 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 UNQ9370/PRO34162Q6UXP9 181 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 C18orf65Q6ZTR6 163 aa12.04□□□□□ -0.48
VTI1A-203ENST00000472892 BPIFB6Q8NFQ5 453 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms