RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 C8orf31Q8N9H6 132 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 GON7Q9BXV9 100 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 SPACA1Q9HBV2 294 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 RAB9BQ9NP90 201 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 LIN7CQ9NUP9 197 aaKnown RBP15.58■□□□□ 0.08
COL9A3-210ENST00000472880 CHCHD3Q9NX63 227 aaKnown RBP15.58■□□□□ 0.08
COL9A3-210ENST00000472880 TRBV5-5A0A0J9YX44 114 aa15.57■□□□□ 0.08
COL9A3-210ENST00000472880 IGFBP3P17936 291 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-210ENST00000472880 GPR12P47775 334 aa15.57■□□□□ 0.08
COL9A3-210ENST00000472880 Q499Y3 187 aa15.57■□□□□ 0.08
COL9A3-210ENST00000472880 TEX38Q6PEX7 206 aa15.57■□□□□ 0.08
COL9A3-210ENST00000472880 Q8N6K4 173 aa15.57■□□□□ 0.08
COL9A3-210ENST00000472880 RTN4IP1Q8WWV3 396 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-210ENST00000472880 GHSRQ92847 366 aa15.57■□□□□ 0.08
COL9A3-210ENST00000472880 P2RX4Q99571 388 aa15.57■□□□□ 0.08
COL9A3-210ENST00000472880 ABCG5Q9H222 651 aa15.57■□□□□ 0.08
COL9A3-210ENST00000472880 MAGEA13PA6NCF6 341 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 MCRIP1C9JLW8 97 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 TXNL1O43396 289 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 LALBAP00709 142 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 MT-ND4P03905 459 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 FSTP19883 344 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 CD69Q07108 199 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 Q3ZCU0 254 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 YIF1BQ5BJH7 314 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 DMKNQ6E0U4 476 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-210ENST00000472880 LAIR2Q6ISS4 152 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 C11orf87Q6NUJ2 197 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 JAGN1Q8N5M9 183 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 Q8N9W7 124 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 FBLIM1Q8WUP2 373 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 NRG4Q8WWG1 115 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 TFAP2CQ92754 450 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 GGHQ92820 318 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 MUL1Q969V5 352 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 TMEM80Q96HE8 168 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 GNG12Q9UBI6 72 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 CLEC2DQ9UHP7 191 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 TRAPPC2LQ9UL33 140 aa15.56■□□□□ 0.08
COL9A3-210ENST00000472880 MRPS28Q9Y2Q9 187 aaKnown RBP15.56■□□□□ 0.08
COL9A3-210ENST00000472880 TRAV8-7A0A075B6U6 113 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 LINC01548A6NM66 108 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 C12orf77C9JDV5 145 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 SPINT2O43291 252 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 RRP9O43818 475 aaKnown RBP15.55■□□□□ 0.08
COL9A3-210ENST00000472880 MOSP00540 346 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 CD1BP29016 333 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 RAB25P57735 213 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 DCTN2Q13561 401 aaKnown RBP15.55■□□□□ 0.08
COL9A3-210ENST00000472880 PNLIPRP3Q17RR3 467 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 TMEM30BQ3MIR4 351 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 CXorf66Q5JRM2 361 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-210ENST00000472880 C6orf183Q5T699 404 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 FAM53AQ6NSI3 398 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-210ENST00000472880 UNQ9370/PRO34162Q6UXP9 181 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 ZFP41Q8N8Y5 198 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 TMEM104Q8NE00 496 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 ST6GALNAC6Q969X2 333 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 MRPS24Q96EL2 167 aaKnown RBP15.55■□□□□ 0.08
COL9A3-210ENST00000472880 RASL11BQ9BPW5 248 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 ETAA1Q9NY74 926 aa15.55■□□□□ 0.08
COL9A3-210ENST00000472880 RCC2Q9P258 522 aaKnown RBP15.55■□□□□ 0.08
COL9A3-210ENST00000472880 ZMAT5Q9UDW3 170 aaKnown RBP15.55■□□□□ 0.08
COL9A3-210ENST00000472880 SLC31A2O15432 143 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 GPX5O75715 221 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 GPR50Q13585 617 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 SYT6Q5T7P8 510 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-210ENST00000472880 AWAT2Q6E213 333 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 RAB12Q6IQ22 244 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 TRAT1Q6PIZ9 186 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 GLIPR1L1Q6UWM5 242 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 SLC25A48Q6ZT89 311 aaKnown RBP15.54■□□□□ 0.08
COL9A3-210ENST00000472880 PRR18Q8N4B5 295 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 OR8H1Q8NGG4 311 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 OR10V1Q8NGI7 309 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 OR4K15Q8NH41 348 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 DUX3Q96PT4 197 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 OR14A2Q96R54 314 aa15.54■□□□□ 0.08
COL9A3-210ENST00000472880 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL9A3-210ENST00000472880 CNOT2Q9NZN8 540 aaKnown RBP15.54■□□□□ 0.08
COL9A3-210ENST00000472880 EFCAB10A6NFE3 127 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 H0YHG0 523 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 CCL24O00175 119 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 RPLP1P05386 114 aaKnown RBP15.53■□□□□ 0.08
COL9A3-210ENST00000472880 ZNF137PP52743 207 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 AQP4P55087 323 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 GP2P55259 537 aaKnown RBP15.53■□□□□ 0.08
COL9A3-210ENST00000472880 TAS2R43P59537 309 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 RPS11P62280 158 aaKnown RBP eCLIP15.53■□□□□ 0.08
COL9A3-210ENST00000472880 ST3GAL4Q11206 333 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 ZNF439Q8NDP4 499 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 OR8U1Q8NH10 309 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 RAX2Q96IS3 184 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 PGLYRP3Q96LB9 341 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 S1PR3Q99500 378 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 B9D2Q9BPU9 175 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 PLCXD1Q9NUJ7 323 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 PSORS1C1Q9UIG5 152 aa15.53■□□□□ 0.08
COL9A3-210ENST00000472880 PNMA8CA0A1B0GUJ8 204 aa15.52■□□□□ 0.08
COL9A3-210ENST00000472880 A0A1W2PPK0 400 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms