RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CT45A3Q8NHU0 189 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 CASTOR1Q8WTX7 329 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 CCDC107Q8WV48 283 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 PELI1Q96FA3 418 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 UBE2E2Q96LR5 201 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 RASL11BQ9BPW5 248 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 BARHL1Q9BZE3 327 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 ZCCHC4Q9H5U6 513 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 KRT84Q9NSB2 600 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 C19orf73Q9NVV2 129 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 CHCHD3Q9NX63 227 aaKnown RBP7.18□□□□□ -1.26
VCL-204ENST00000472585 AASSQ9UDR5 926 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 ZNF107Q9UII5 783 aaPredicted RBP7.18□□□□□ -1.26
VCL-204ENST00000472585 ZNF580Q9UK33 172 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 FBXO7Q9Y3I1 522 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 E9PI62 339 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 GABRPO00591 440 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 OVOL1O14753 267 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 LY6G6CO95867 125 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 RAB9AP51151 201 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 CCR9P51686 369 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 FLOT2Q14254 428 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 C19orf54Q5BKX5 351 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 ZNF691Q5VV52 312 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 LPCAT4Q643R3 524 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 ZNF529Q6P280 563 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 MINDY2Q8NBR6 621 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 ARL11Q969Q4 196 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 CIB1Q99828 191 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 DPCDQ9BVM2 203 aaPredicted RBP7.17□□□□□ -1.26
VCL-204ENST00000472585 ISG20L2Q9H9L3 353 aaKnown RBP7.17□□□□□ -1.26
VCL-204ENST00000472585 GFOD1Q9NXC2 390 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 KIAA1456Q9P272 454 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 POMPQ9Y244 141 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 RYR1P21817 5038 aa7.17□□□□□ -1.26
VCL-204ENST00000472585 IGHV4OR15-8A0A075B7B6 117 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 A0A087WW49 117 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 IGHV7-81A0A0B4J1V7 117 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 G3V2T6 193 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 SDCBPO00560 298 aaPredicted RBP7.16□□□□□ -1.26
VCL-204ENST00000472585 ATP6V0E1O15342 81 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 SLC16A6O15403 523 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 SULT1B1O43704 296 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 CDRT1O95170 752 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 FAM107AO95990 144 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 MT-ND4P03905 459 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 EGR2P11161 476 aaPredicted RBP7.16□□□□□ -1.26
VCL-204ENST00000472585 DBTP11182 482 aaKnown RBP7.16□□□□□ -1.26
VCL-204ENST00000472585 VDAC1P21796 283 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 ZNF137PP52743 207 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 NDPQ00604 133 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 ALKBH1Q13686 389 aaKnown RBP7.16□□□□□ -1.26
VCL-204ENST00000472585 IL13RA2Q14627 380 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 ACSM6Q6P461 480 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 TMEM65Q6PI78 240 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 SLC25A48Q6ZT89 311 aaKnown RBP7.16□□□□□ -1.26
VCL-204ENST00000472585 AMIGO2Q86SJ2 522 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 PARP16Q8N5Y8 322 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 C8orf31Q8N9H6 132 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 PXT1Q8NFP0 134 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 OR52M1Q8NGK5 317 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 LINC00476Q8WZB0 136 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 RGP1Q92546 391 aaPredicted RBP7.16□□□□□ -1.26
VCL-204ENST00000472585 SLC7A6OSQ96CW6 309 aaPredicted RBP7.16□□□□□ -1.26
VCL-204ENST00000472585 PDCD1LG2Q9BQ51 273 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 TOLLIPQ9H0E2 274 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 GABARAPL1Q9H0R8 117 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 VSIG4Q9Y279 399 aa7.16□□□□□ -1.26
VCL-204ENST00000472585 A0A1W2PP11 408 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 C12orf77C9JDV5 145 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 J3QLW9 94 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 GEMIN2O14893 280 aaKnown RBP7.15□□□□□ -1.26
VCL-204ENST00000472585 HTR1AP08908 422 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 OCM2P0CE71 109 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 OCMP0CE72 109 aaPredicted RBP7.15□□□□□ -1.26
VCL-204ENST00000472585 ZNF19P17023 458 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 GZMHP20718 246 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 BLVRBP30043 206 aaPredicted RBP7.15□□□□□ -1.26
VCL-204ENST00000472585 ATP6V1E1P36543 226 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 TMED1Q13445 227 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 GALEQ14376 348 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 ATP6AP1Q15904 470 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 FAM220AQ7Z4H9 259 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 KCTD20Q7Z5Y7 419 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 LYPD6Q86Y78 171 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 SERPINA12Q8IW75 414 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 ODF3L1Q8IXM7 274 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 OR8H1Q8NGG4 311 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 OR5D14Q8NGL3 314 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 OR8J1Q8NGP2 316 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 OR1L1Q8NH94 360 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 TNFAIP8L1Q8WVP5 186 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 ARPC1AQ92747 370 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 ORAI1Q96D31 301 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 C4orf36Q96KX1 117 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 ANKRD60Q9BZ19 345 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 PRRG3Q9BZD7 231 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 OR51J1Q9H342 316 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 IFT22Q9H7X7 185 aa7.15□□□□□ -1.26
VCL-204ENST00000472585 ALMS1Q8TCU4 4167 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms