RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 HLA-DRB5Q30154 266 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 Q3ZCU0 254 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 CCDC144NLQ6NUI1 221 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 MOB1BQ7L9L4 216 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 LHFPL4Q7Z7J7 247 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 NR2C2APQ86WQ0 139 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 RAB3CQ96E17 227 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 CHIAQ9BZP6 476 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 ABRACLQ9P1F3 81 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 VPREB3Q9UKI3 123 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 A0A0A6YYD4 124 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 BUB1B-PAK6H3BSN5 160 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 J3QR06 171 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 F2RL2O00254 374 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 HKR1P10072 659 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 SLC2A2P11168 524 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-211ENST00000472490 RCC1P18754 421 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-211ENST00000472490 GDNFP39905 211 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 FOXL1Q12952 345 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 PRR18Q8N4B5 295 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 OR4P4Q8NGL7 312 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 OR13F1Q8NGS4 319 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 OR10R2Q8NGX6 335 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
BRCA1-211ENST00000472490 C17orf50Q8WW18 174 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 PHF21AQ96BD5 680 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 GALMQ96C23 342 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 AJUBAQ96IF1 538 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 ARHGAP5-AS1Q96IT6 56 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 FUNDC2Q9BWH2 189 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 ATG5Q9H1Y0 275 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 MMP28Q9H239 520 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 RNF167Q9H6Y7 350 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 TAF9BQ9HBM6 251 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 ZNF286AQ9HBT8 521 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 RAB18Q9NP72 206 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 C12orf4Q9NQ89 552 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 GNG12Q9UBI6 72 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 PITPNC1Q9UKF7 332 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 ETV7Q9Y603 341 aa11.51□□□□□ -0.57
BRCA1-211ENST00000472490 TMEM89A2RUT3 159 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 FAM172BPA6NC97 362 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 FAM181BA6NEQ2 426 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 FOXI3A8MTJ6 420 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-211ENST00000472490 SERPINE3A8MV23 424 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 H3BUX3 64 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 NAPSAO96009 420 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 HBZP02008 142 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 SMIM18P0DKX4 95 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 BRS3P32247 399 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 MNDAP41218 407 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 DYNLT3P51808 116 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 TMEM50BP56557 158 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 MADCAM1Q13477 382 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 IDNKQ5T6J7 187 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 BAIAP2L2Q6UXY1 529 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 C8orf31Q8N9H6 132 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 DTX3Q8N9I9 347 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 OR10X1Q8NGY0 326 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 RPEQ96AT9 228 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 CMSS1Q9BQ75 279 aaKnown RBP11.5□□□□□ -0.57
BRCA1-211ENST00000472490 PECRQ9BY49 303 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 GFOD1Q9NXC2 390 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 AK3Q9UIJ7 227 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 PSG11Q9UQ72 335 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 HILPDAQ9Y5L2 63 aa11.5□□□□□ -0.57
BRCA1-211ENST00000472490 TRBV6-6A0A0A6YYG2 114 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 GPR137BO60478 399 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 RGS11O94810 467 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 CD3GP09693 182 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 EFNB2P52799 333 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 LOXL3P58215 753 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 LSM3P62310 102 aaKnown RBP11.49□□□□□ -0.57
BRCA1-211ENST00000472490 HTD2P86397 168 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 STEAP3Q658P3 488 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 GPR141Q7Z602 305 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 SETD6Q8TBK2 473 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 OR2S2Q9NQN1 319 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 JPT1Q9UK76 154 aa11.49□□□□□ -0.57
BRCA1-211ENST00000472490 A0A0B4J203 849 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 A0A1B0GUS0 222 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 RAB27BO00194 218 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 LPLP06858 475 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 CLEC2LP0C7M8 214 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 SNRPBP14678 240 aaKnown RBP11.48□□□□□ -0.57
BRCA1-211ENST00000472490 HIST1H1DP16402 221 aaKnown RBP11.48□□□□□ -0.57
BRCA1-211ENST00000472490 IL3RAP26951 378 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-211ENST00000472490 GNG10P50151 68 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 RAB7AP51149 207 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 PLAC9Q5JTB6 97 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 TPTE2P1Q5T6R2 138 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 DHRS7BQ6IAN0 325 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-211ENST00000472490 C12orf54Q6X4T0 127 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 ANKRD13BQ86YJ7 626 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 OR4F5Q8NH21 305 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 LGALS14Q8TCE9 139 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms