RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SDCBPO00560 298 aaPredicted RBP6.33□□□□□ -1.4
USP48-207ENST00000471752 MPZL2O60487 215 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 GPX5O75715 221 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 HBZP02008 142 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 CEACAM3P40198 252 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 MNDAP41218 407 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 GPR12P47775 334 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 OR3A3P47888 321 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 LUMP51884 338 aaPredicted RBP6.33□□□□□ -1.4
USP48-207ENST00000471752 LINC00205P59089 165 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 PAX5Q02548 391 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 EGFEM1PQ0D2K5 195 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 ZNF816Q0VGE8 651 aaPredicted RBP6.33□□□□□ -1.4
USP48-207ENST00000471752 RIPK1Q13546 671 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 KIAA0141Q14154 515 aaPredicted RBP6.33□□□□□ -1.4
USP48-207ENST00000471752 CCDC58Q4VC31 144 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 NHLRC3Q5JS37 347 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 ODF3L1Q8IXM7 274 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 STPG2Q8N412 459 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 PRR18Q8N4B5 295 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 HAVCR2Q8TDQ0 301 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 RTN4IP1Q8WWV3 396 aaPredicted RBP6.33□□□□□ -1.4
USP48-207ENST00000471752 FAM46BQ96A09 425 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 SMIM19Q96E16 107 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 TMEM80Q96HE8 168 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 P2RX4Q99571 388 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 SELENOIQ9C0D9 397 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 KLK15Q9H2R5 256 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 DCLRE1BQ9H816 532 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 IL36GQ9NZH8 169 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 RCC2Q9P258 522 aaKnown RBP6.33□□□□□ -1.4
USP48-207ENST00000471752 MRPS28Q9Y2Q9 187 aaKnown RBP6.33□□□□□ -1.4
USP48-207ENST00000471752 PEX16Q9Y5Y5 336 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 DNAH1Q9P2D7 4330 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 CSMD3Q7Z407 3707 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 A0A0A6YYD4 124 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 G3V318 75 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 MAGEB3O15480 346 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 GAPDHP04406 335 aaKnown RBP6.32□□□□□ -1.4
USP48-207ENST00000471752 GZMHP20718 246 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 PPP1CCP36873 323 aaKnown RBP6.32□□□□□ -1.4
USP48-207ENST00000471752 CFHR3Q02985 330 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 Q499Y3 187 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 RAB12Q6IQ22 244 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 CCDC144NLQ6NUI1 221 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 TMPRSS11AQ6ZMR5 421 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 REC114Q7Z4M0 266 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 SLC35E3Q7Z769 313 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 GAPTQ8N292 157 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 JAGN1Q8N5M9 183 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 LINC00311Q8N616 119 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 KLHL30-AS1Q8NEE0 82 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 ZNF555Q8NEP9 628 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 OR4X2Q8NGF9 303 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 MRPL30Q8TCC3 161 aaKnown RBP6.32□□□□□ -1.4
USP48-207ENST00000471752 NEK7Q8TDX7 302 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 CASTOR1Q8WTX7 329 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 TFAP2CQ92754 450 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 MRPL48Q96GC5 212 aaKnown RBP6.32□□□□□ -1.4
USP48-207ENST00000471752 AKR1E2Q96JD6 320 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 DERL3Q96Q80 235 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 S1PR3Q99500 378 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 GFI1Q99684 422 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 SULT4A1Q9BR01 284 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 NICN1Q9BSH3 213 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 ETAA1Q9NY74 926 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 NKX1-2Q9UD57 310 aaPredicted RBP6.32□□□□□ -1.4
USP48-207ENST00000471752 PSORS1C1Q9UIG5 152 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 SCOCQ9UIL1 159 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 EXOSC1Q9Y3B2 195 aaKnown RBP6.32□□□□□ -1.4
USP48-207ENST00000471752 WSB1Q9Y6I7 421 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 STARD9Q9P2P6 4700 aa6.32□□□□□ -1.4
USP48-207ENST00000471752 NUDT19A8MXV4 375 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 AIPO00170 330 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 FCN1O00602 326 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 FGF16O43320 207 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 ORC5O43913 435 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 CRTAPO75718 401 aaPredicted RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 CSTBP04080 98 aaKnown RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 CD2P06729 351 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 SLC2A2P11168 524 aaPredicted RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 GTF2F2P13984 249 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 MGMTP16455 207 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 CELP19835 753 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 HTR2CP28335 458 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 RAB7AP51149 207 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 RAB25P57735 213 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 PPP3R1P63098 170 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 SLC35A2P78381 396 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 MRPL28Q13084 256 aaKnown RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 PLA2G7Q13093 441 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 NKAPLQ5M9Q1 402 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 ASPHD1Q5U4P2 390 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 UNQ9370/PRO34162Q6UXP9 181 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 SLC25A48Q6ZT89 311 aaKnown RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 AHSA2Q719I0 299 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 LRRTM1Q86UE6 522 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 ZNF695Q8IW36 515 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 OR8H3Q8N146 312 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 FAM71E2Q8N5Q1 922 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms