RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ATP5SQ99766 215 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 SPIN2AQ99865 258 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 SPIN2BQ9BPZ2 258 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 DUSP23Q9BVJ7 150 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 PLSCR2Q9NRY7 297 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 DOCK10Q96BY6 2186 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 A0A1B0GW64 132 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 IGKV1-39P01597 117 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 IGKV1D-39P04432 117 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 PGA5P0DJD9 388 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 DEFA4P12838 97 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 TAS2R30P59541 319 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 FAM90A2PQ658T7 463 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 SP5Q6BEB4 398 aaPredicted RBP10.3□□□□□ -0.76
VARS2-205ENST00000469358 MRPL21Q7Z2W9 205 aaKnown RBP10.3□□□□□ -0.76
VARS2-205ENST00000469358 C1QL4Q86Z23 238 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 TUSC5Q8IXB3 177 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 ADGRG7Q96K78 797 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 SNX22Q96L94 193 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 SMOC1Q9H4F8 434 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 WDR54Q9H977 334 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 NOSIPQ9Y314 301 aaKnown RBP10.3□□□□□ -0.76
VARS2-205ENST00000469358 SERPINE2P07093 398 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 SRD5A2P31213 254 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 MAS1LP35410 378 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 GLIPR1P48060 266 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 HLA-DRB3P79483 266 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 MED12LQ86YW9 2145 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 LURAP1LQ8IV03 231 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 SGCZQ96LD1 299 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 C1QTNF5Q9BXJ0 243 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 GJE1A6NN92 205 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 MRPL33O75394 65 aaKnown RBP10.29□□□□□ -0.76
VARS2-205ENST00000469358 F2RP25116 425 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 FGF12P61328 243 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 GAMTQ14353 236 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 HAPLN4Q86UW8 402 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 CCDC54Q8NEL0 328 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 MRPL30Q8TCC3 161 aaKnown RBP10.29□□□□□ -0.76
VARS2-205ENST00000469358 LOC102723971A0A1B0GUV8 181 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 TRAPPC2LH3BP13 241 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 TUSC2O75896 110 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 HSPB1P04792 205 aaKnown RBP10.29□□□□□ -0.76
VARS2-205ENST00000469358 FOLR3P41439 243 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 SRPXP78539 464 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 ZNF787Q6DD87 383 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 MAFAQ8NHW3 353 aaPredicted RBP10.29□□□□□ -0.76
VARS2-205ENST00000469358 M1APQ8TC57 530 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 GNPNAT1Q96EK6 184 aaPredicted RBP10.29□□□□□ -0.76
VARS2-205ENST00000469358 PLK3Q9H4B4 646 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 CFAP47Q6ZTR5 3102 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 TRAV24A0A0B4J272 114 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 KIAA1324LA8MWY0 1029 aaPredicted RBP10.29□□□□□ -0.76
VARS2-205ENST00000469358 TLE4Q04727 773 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 ABLIM2Q6H8Q1 611 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 STX12Q86Y82 276 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 S100PBPQ96BU1 408 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 FAM210BQ96KR6 192 aa10.29□□□□□ -0.76
VARS2-205ENST00000469358 REPIN1Q9BWE0 567 aaKnown RBP10.29□□□□□ -0.76
VARS2-205ENST00000469358 FAM166BA8MTA8 275 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 CEBPZOSA8MTT3 80 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 PCBD1P61457 104 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 NKX6-1P78426 367 aaPredicted RBP10.28□□□□□ -0.76
VARS2-205ENST00000469358 ZFP36L1Q07352 338 aaKnown RBP10.28□□□□□ -0.76
VARS2-205ENST00000469358 SPANXN5Q5MJ07 72 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 ZDHHC23Q8IYP9 409 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 FAM185AQ8N0U4 392 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 PRDM13Q9H4Q3 707 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 RBM7Q9Y580 266 aaKnown RBP10.28□□□□□ -0.76
VARS2-205ENST00000469358 ATP23Q9Y6H3 246 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 SPENQ96T58 3664 aaKnown RBP10.28□□□□□ -0.76
VARS2-205ENST00000469358 GALR2O43603 387 aaPredicted RBP10.28□□□□□ -0.76
VARS2-205ENST00000469358 WDR1O75083 606 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 BMP5P22003 454 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 TUBG1P23258 451 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 GPX4P36969 197 aaPredicted RBP10.28□□□□□ -0.76
VARS2-205ENST00000469358 OR8G2PQ6IF36 304 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 PPP1R32Q7Z5V6 425 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 HIST3H2BBQ8N257 126 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 SPSB4Q96A44 273 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 PLA2G3Q9NZ20 509 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 KCNS2Q9ULS6 477 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 USF3Q68DE3 2245 aa10.28□□□□□ -0.76
VARS2-205ENST00000469358 PPP1R2P9O14990 202 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 IFNA5P01569 189 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 IGKV1-5P01602 117 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 TFF1P04155 84 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 IL11RAQ14626 422 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 ZNF324BQ6AW86 544 aaPredicted RBP10.27□□□□□ -0.76
VARS2-205ENST00000469358 MKXQ8IYA7 352 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 OR10J5Q8NHC4 309 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 GATAD1Q8WUU5 269 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 PSMF1Q92530 271 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 CLDN23Q96B33 292 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 RCC1LQ96I51 464 aaKnown RBP10.27□□□□□ -0.76
VARS2-205ENST00000469358 UNKLQ9H9P5 680 aaKnown RBP10.27□□□□□ -0.76
VARS2-205ENST00000469358 LRFN1Q9P244 771 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 DMRT1Q9Y5R6 373 aa10.27□□□□□ -0.76
VARS2-205ENST00000469358 H0Y980 276 aa10.27□□□□□ -0.77
VARS2-205ENST00000469358 SIRPB1O00241 398 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms