RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 A0A1W2PPQ1 181 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 HELTA6NFD8 242 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 PMP2P02689 132 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 ADH4P08319 380 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 BTG1P62324 171 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 IL13RA2Q14627 380 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 AGAP6Q5VW22 663 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF660Q6AZW8 331 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-208ENST00000468300 ACP7Q6ZNF0 438 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 SLC36A1Q7Z2H8 476 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 ZCCHC24Q8N2G6 241 aaKnown RBP6.94□□□□□ -1.3
BRCA1-208ENST00000468300 SUMF2Q8NBJ7 301 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 PCNPQ8WW12 178 aaKnown RBP6.94□□□□□ -1.3
BRCA1-208ENST00000468300 OR2V2Q96R30 315 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 KCNJ16Q9NPI9 418 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 A0A1W2PPR1 153 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 TMEM82A0PJX8 343 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 C7orf66A4D0T2 115 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 PYCARD-AS1I3L0S3 204 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 SPRY3O43610 288 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 OR7C1O76099 320 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-208ENST00000468300 CYB5AP00167 134 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 VSIG10L2P0DP72 767 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 IGFBP2P18065 325 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 AGAP20933 346 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 COMPP49747 757 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-208ENST00000468300 RPS23P62266 143 aaKnown RBP6.94□□□□□ -1.3
BRCA1-208ENST00000468300 RNF151Q2KHN1 245 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 VAX1Q5SQQ9 334 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 GAPTQ8N292 157 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF843Q8N446 348 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 GCSAMQ8N6F7 178 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 ELMOD3Q96FG2 381 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 ST6GALNAC5Q9BVH7 336 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 CHST6Q9GZX3 395 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 GCM1Q9NP62 436 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 BIN3Q9NQY0 253 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 POLDIP2Q9Y2S7 368 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 PLCE1Q9P212 2302 aa6.94□□□□□ -1.3
BRCA1-208ENST00000468300 CENPXA8MT69 81 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 INMT-MINDY4F8WBC2 141 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 PSPNO60542 156 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 OR2H2O95918 312 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF25P17030 456 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 LMO1P25800 156 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 RAG2P55895 527 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF273Q14593 569 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 AADACL3Q5VUY0 350 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF880Q6PDB4 577 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 LHFPL1Q86WI0 220 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ITLN1Q8WWA0 313 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 RCC1LQ96I51 464 aaKnown RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 PLK3Q9H4B4 646 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 METTL8Q9H825 291 aaKnown RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 MCUBQ9NWR8 336 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 C1orf123Q9NWV4 160 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 COPZ2Q9P299 210 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 METRNQ9UJH8 293 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 BOLA1Q9Y3E2 137 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 FLNCQ14315 2725 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 LEUTXA8MZ59 168 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 SRRM5B3KS81 715 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 HPXP02790 462 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 CD55P08174 381 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ATP5J2P56134 94 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 RBX1P62877 108 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 NKPD1Q17RQ9 610 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 NCR3LG1Q68D85 454 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 Q8IYB0 196 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 CD177Q8N6Q3 437 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 CLRN3Q8NCR9 226 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 BEST4Q8NFU0 473 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 OR10A7Q8NGE5 316 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 OR4K15Q8NH41 348 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 PLPPR1Q8TBJ4 325 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 MRPL30Q8TCC3 161 aaKnown RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 GSX1Q9H4S2 264 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF430Q9H8G1 570 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 VSIG4Q9Y279 399 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 UTP20O75691 2785 aaKnown RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 DYSFO75923 2080 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 TUBAL3A6NHL2 446 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 CEACAM18A8MTB9 384 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 CLDN14O95500 239 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 IKZF1Q13422 519 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ARFRP1Q13795 201 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF782Q6ZMW2 699 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 Q6ZS49 121 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF808Q8N4W9 903 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 OR5AP2Q8NGF4 316 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 STOML3Q8TAV4 291 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 DPCDQ9BVM2 203 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-208ENST00000468300 SHARPINQ9H0F6 387 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 TMEM160Q9NX00 188 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 PGPEP1Q9NXJ5 209 aa6.93□□□□□ -1.3
BRCA1-208ENST00000468300 TPRP12270 2363 aaKnown RBP6.92□□□□□ -1.3
BRCA1-208ENST00000468300 DSCAMO60469 2012 aa6.92□□□□□ -1.3
BRCA1-208ENST00000468300 NBASA2RRP1 2371 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms