RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 OR2T10Q8NGZ9 312 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 OR4K15Q8NH41 348 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 NEK7Q8TDX7 302 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 CPNE2Q96FN4 548 aaPredicted RBP16.1■□□□□ 0.17
COL6A1-203ENST00000466285 ZNF184Q99676 751 aaPredicted RBP16.1■□□□□ 0.17
COL6A1-203ENST00000466285 MCRIP2Q9BUT9 160 aaKnown RBP16.1■□□□□ 0.17
COL6A1-203ENST00000466285 GPR61Q9BZJ8 451 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 TMEM138Q9NPI0 162 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 RCC2Q9P258 522 aaKnown RBP16.1■□□□□ 0.17
COL6A1-203ENST00000466285 SACSQ9NZJ4 4579 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 TRBV5-5A0A0J9YX44 114 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 AIPO00170 330 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 BDKRB2P30411 391 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 ADARB1P78563 741 aaKnown RBP16.09■□□□□ 0.17
COL6A1-203ENST00000466285 CT45A1Q5HYN5 189 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 RPL22L1Q6P5R6 122 aaKnown RBP16.09■□□□□ 0.17
COL6A1-203ENST00000466285 TEX38Q6PEX7 206 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 RNF152Q8N8N0 203 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 OR52M1Q8NGK5 317 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 CT45A3Q8NHU0 189 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 RITA1Q96K30 269 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 SCOCQ9UIL1 159 aa16.09■□□□□ 0.17
COL6A1-203ENST00000466285 RPL36Q9Y3U8 105 aaKnown RBP16.09■□□□□ 0.17
COL6A1-203ENST00000466285 A0A1W2PPK0 400 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 ERICH4A6NGS2 130 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 SLC2A2P11168 524 aaPredicted RBP16.08■□□□□ 0.16
COL6A1-203ENST00000466285 MYF6P23409 242 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 CNTFRP26992 372 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 PNLIPRP3Q17RR3 467 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 MPV17LQ2QL34 196 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 SLC25A48Q6ZT89 311 aaKnown RBP16.08■□□□□ 0.16
COL6A1-203ENST00000466285 PRR18Q8N4B5 295 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 C8orf31Q8N9H6 132 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 MUL1Q969V5 352 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 SMIM19Q96E16 107 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 PGLYRP3Q96LB9 341 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 Q96MT0 163 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 ASCL2Q99929 193 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 C9orf16Q9BUW7 83 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 GNB4Q9HAV0 340 aa16.08■□□□□ 0.16
COL6A1-203ENST00000466285 OGG1O15527 345 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 RRP9O43818 475 aaKnown RBP16.07■□□□□ 0.16
COL6A1-203ENST00000466285 ORC5O43913 435 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 MPZL2O60487 215 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 MOSP00540 346 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 CSTBP04080 98 aaKnown RBP16.07■□□□□ 0.16
COL6A1-203ENST00000466285 CD2P06729 351 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 RCC1P18754 421 aaPredicted RBP16.07■□□□□ 0.16
COL6A1-203ENST00000466285 SLC6A1P30531 599 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 ZNF137PP52743 207 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 PPP3R1P63098 170 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 FOXE3Q13461 319 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 RIPK1Q13546 671 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 FHL3Q13643 280 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 KLHL22Q53GT1 634 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 CXorf66Q5JRM2 361 aaPredicted RBP16.07■□□□□ 0.16
COL6A1-203ENST00000466285 SYT6Q5T7P8 510 aaPredicted RBP16.07■□□□□ 0.16
COL6A1-203ENST00000466285 ZFP1Q6P2D0 407 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 ZNF485Q8NCK3 441 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 OR8U1Q8NH10 309 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 KLK15Q9H2R5 256 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 BANF2Q9H503 90 aa16.07■□□□□ 0.16
COL6A1-203ENST00000466285 ANKRD65E5RJM6 399 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 IGHG4P01861 327 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 HBZP02008 142 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 GZMHP20718 246 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 CD1BP29016 333 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 LSAMPQ13449 338 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 KIAA0141Q14154 515 aaPredicted RBP16.06■□□□□ 0.16
COL6A1-203ENST00000466285 KIR2DS1Q14954 304 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 CCDC58Q4VC31 144 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 DMKNQ6E0U4 476 aaPredicted RBP16.06■□□□□ 0.16
COL6A1-203ENST00000466285 SIGIRRQ6IA17 410 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 LINC00596Q86U02 117 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 MYOZ3Q8TDC0 251 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 GHSRQ92847 366 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 KCTD7Q96MP8 289 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 OR14A2Q96R54 314 aa16.06■□□□□ 0.16
COL6A1-203ENST00000466285 PNMA8CA0A1B0GUJ8 204 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 SEC14L6B5MCN3 397 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 G3V318 75 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 PSMB8P28062 276 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 ECI1P42126 302 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 CDX1P47902 265 aaPredicted RBP16.05■□□□□ 0.16
COL6A1-203ENST00000466285 RAB12Q6IQ22 244 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 LYPD6Q86Y78 171 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 ODF3L1Q8IXM7 274 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 GAPTQ8N292 157 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 PQLC1Q8N2U9 271 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 OR5M8Q8NGP6 311 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 S100A14Q9HCY8 104 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 ETAA1Q9NY74 926 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 GNG12Q9UBI6 72 aa16.05■□□□□ 0.16
COL6A1-203ENST00000466285 MRPS28Q9Y2Q9 187 aaKnown RBP16.05■□□□□ 0.16
COL6A1-203ENST00000466285 TRBV5-7A0A0A0MS05 114 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 GTF2F2P13984 249 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 SNRPBP14678 240 aaKnown RBP16.04■□□□□ 0.16
COL6A1-203ENST00000466285 GNB1P62873 340 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 GLIPR1L1Q6UWM5 242 aa16.04■□□□□ 0.16
COL6A1-203ENST00000466285 UNQ9370/PRO34162Q6UXP9 181 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms