RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 TMEM104Q8NE00 496 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 OR13C5Q8NGS8 318 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 OR2T10Q8NGZ9 312 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 RTN4IP1Q8WWV3 396 aaPredicted RBP9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 GHSRQ92847 366 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 ORAI1Q96D31 301 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 PGLYRP3Q96LB9 341 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 P2RX4Q99571 388 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 ABCG5Q9H222 651 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 RAB9BQ9NP90 201 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 TRBV5-7A0A0A0MS05 114 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 A0A1W2PP11 408 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 FAM90A10PA6NDY2 464 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 FAM90A7PA6NKC0 464 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 FAM90A23PA8MXZ1 464 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 H0YHG0 523 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 AIPO00170 330 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 AP4M1O00189 453 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 TXNL1O43396 289 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 GPR12P47775 334 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 SLC22A6Q4U2R8 563 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 VAX1Q5SQQ9 334 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 TTC23Q5W5X9 447 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 TEX38Q6PEX7 206 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 SLC25A48Q6ZT89 311 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 C18orf65Q6ZTR6 163 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 C8orf86Q6ZUL3 223 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 STX19Q8N4C7 294 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 Q8N9W7 124 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 ZNF439Q8NDP4 499 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 OR8H1Q8NGG4 311 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 CCDC107Q8WV48 283 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 TMEM80Q96HE8 168 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 GON7Q9BXV9 100 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 PLSCR3Q9NRY6 295 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 CKLFQ9UBR5 152 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 ZMAT5Q9UDW3 170 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 CLEC2DQ9UHP7 191 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 LINC00527Q9UJ94 153 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 DNAH7Q8WXX0 4024 aa9.81□□□□□ -0.84
SOX2-OT-203ENST00000466034 TRAV8-7A0A075B6U6 113 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 IGHV3-72A0A0B4J1Y9 119 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 MAGEA13PA6NCF6 341 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 LINC01548A6NM66 108 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 NUDT19A8MXV4 375 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 C12orf77C9JDV5 145 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 MCRIP1C9JLW8 97 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 ST8SIA5O15466 376 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 SPINT2O43291 252 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 CA11O75493 328 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 SC5DO75845 299 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 MOSP00540 346 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 GLAP06280 429 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 HOXD3P31249 432 aaPredicted RBP9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 REG1BP48304 166 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 GP2P55259 537 aaKnown RBP9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 TAS2R43P59537 309 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 DCTN2Q13561 401 aaKnown RBP9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 PNLIPRP3Q17RR3 467 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 C6orf183Q5T699 404 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 TRAT1Q6PIZ9 186 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 LYPD6Q86Y78 171 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 ZNF695Q8IW36 515 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 SETD9Q8NE22 299 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 KLHL30-AS1Q8NEE0 82 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 NEK7Q8TDX7 302 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 S1PR3Q99500 378 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 C8orf4Q9NR00 106 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 CHCHD3Q9NX63 227 aaKnown RBP9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 ZNF580Q9UK33 172 aa9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 MRPS28Q9Y2Q9 187 aaKnown RBP9.8□□□□□ -0.84
SOX2-OT-203ENST00000466034 IGHV3-43A0A0B4J1X8 118 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 A6NHS1 94 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 NCBP2LA6PVI3 153 aaKnown RBP9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 SLC31A2O15432 143 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 BAG2O95816 211 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 CD1AP06126 327 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 ELANEP08246 267 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 IGHV3-43DP0DP04 118 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 VHLP40337 213 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 CFHR3Q02985 330 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 FOXE3Q13461 319 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 DEFB121Q5J5C9 76 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 SYT6Q5T7P8 510 aaPredicted RBP9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 STEAP3Q658P3 488 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 FAM53AQ6NSI3 398 aaPredicted RBP9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 GLIPR1L1Q6UWM5 242 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 ZNF554Q86TJ5 538 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 FAM71E2Q8N5Q1 922 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 PACRGLQ8N7B6 248 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 UBALD1Q8TB05 177 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 GGHQ92820 318 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 MUL1Q969V5 352 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 RAX2Q96IS3 184 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 B9D2Q9BPU9 175 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 ETAA1Q9NY74 926 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 TRAPPC2LQ9UL33 140 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 RYR3Q15413 4870 aa9.79□□□□□ -0.84
SOX2-OT-203ENST00000466034 TENM3Q9P273 2699 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms