RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 C6orf183Q5T699 404 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 SYT6Q5T7P8 510 aaPredicted RBP10.51□□□□□ -0.73
COL28A1-206ENST00000465339 OR10K2Q6IF99 312 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 TRAT1Q6PIZ9 186 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 ZNF773Q6PK81 442 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 Q6ZSV7 163 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 OR2W3Q7Z3T1 314 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 URM1Q9BTM9 101 aaKnown RBP10.51□□□□□ -0.73
COL28A1-206ENST00000465339 TM2D1Q9BX74 207 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 MMP28Q9H239 520 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 PSG11Q9UQ72 335 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 TCF19Q9Y242 345 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 RNF114Q9Y508 228 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 A6NDX4 124 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 LY6LH3BQJ8 138 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 C15orf65H3BRN8 121 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 F2RL2O00254 374 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 SPINT2O43291 252 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 MYL9P24844 172 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 PSMB9P28065 219 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 CHATP28329 748 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 KIR2DS4P43632 304 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 UNC119Q13432 240 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 TMEM30BQ3MIR4 351 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 Q3ZCU0 254 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 KCTD21Q4G0X4 260 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 ARSJQ5FYB0 599 aaPredicted RBP10.5□□□□□ -0.73
COL28A1-206ENST00000465339 TPTE2P1Q5T6R2 138 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 CCDC144NLQ6NUI1 221 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 ZNF554Q86TJ5 538 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 SGMS2Q8NHU3 365 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 NPFFR1Q9GZQ6 430 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 RANBP3Q9H6Z4 567 aaPredicted RBP10.5□□□□□ -0.73
COL28A1-206ENST00000465339 FBLN5Q9UBX5 448 aa10.5□□□□□ -0.73
COL28A1-206ENST00000465339 ANK2Q01484 3957 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 SDCBPO00560 298 aaPredicted RBP10.49□□□□□ -0.73
COL28A1-206ENST00000465339 BLVRBP30043 206 aaPredicted RBP10.49□□□□□ -0.73
COL28A1-206ENST00000465339 FGF9P31371 208 aaPredicted RBP10.49□□□□□ -0.73
COL28A1-206ENST00000465339 MNDAP41218 407 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 MADCAM1Q13477 382 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 P2RY14Q15391 338 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 LTC4SQ16873 150 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 C2orf76Q3KRA6 126 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 NKAPLQ5M9Q1 402 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 UTF1Q5T230 341 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 C11orf88Q6PI97 169 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 FAM89BQ8N5H3 189 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 C8orf31Q8N9H6 132 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 OR51D1Q8NGF3 324 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 OR4K15Q8NH41 348 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 WFDC12Q8WWY7 111 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 FAM3DQ96BQ1 224 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 FAAP24Q9BTP7 215 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 MBNL3Q9NUK0 354 aaKnown RBP10.49□□□□□ -0.73
COL28A1-206ENST00000465339 PLEKHJ1Q9NW61 149 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 KCNIP1Q9NZI2 227 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 STEAP1Q9UHE8 339 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 FBN3Q75N90 2809 aa10.49□□□□□ -0.73
COL28A1-206ENST00000465339 C12orf77C9JDV5 145 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 CHST1O43916 411 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 IGHV3-7P01780 117 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 RCC1P18754 421 aaPredicted RBP10.48□□□□□ -0.73
COL28A1-206ENST00000465339 RAB3BP20337 219 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 LOXL3P58215 753 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 PROK1P58294 105 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 C22orf42Q6IC83 251 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 CCBE1Q6UXH8 406 aaPredicted RBP10.48□□□□□ -0.73
COL28A1-206ENST00000465339 C6orf201Q7Z4U5 140 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 LINC00311Q8N616 119 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 LEAP2Q969E1 77 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 RPEQ96AT9 228 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 EAF1Q96JC9 268 aaPredicted RBP10.48□□□□□ -0.73
COL28A1-206ENST00000465339 SULT4A1Q9BR01 284 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 NICN1Q9BSH3 213 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 LPAR5Q9H1C0 372 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 KCNK15Q9H427 330 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 GFOD1Q9NXC2 390 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 HSF4Q9ULV5 492 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 STUB1Q9UNE7 303 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 SSR3Q9UNL2 185 aa10.48□□□□□ -0.73
COL28A1-206ENST00000465339 IFITM5A6NNB3 132 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 HBZP02008 142 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 JUNBP17275 347 aaPredicted RBP10.47□□□□□ -0.73
COL28A1-206ENST00000465339 GNG10P50151 68 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 RAB7AP51149 207 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 CLDN12P56749 244 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 HES5Q5TA89 166 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 C16orf82Q7Z2V1 217 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 TPRA1Q86W33 373 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 THNSL2Q86YJ6 484 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 OR56B1Q8NGI3 324 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 OR10X1Q8NGY0 326 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 OR2T6Q8NHC8 308 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 MRPL30Q8TCC3 161 aaKnown RBP10.47□□□□□ -0.73
COL28A1-206ENST00000465339 TOMM40LQ969M1 308 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 AKR1E2Q96JD6 320 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 PRSS22Q9GZN4 317 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 RIMS4Q9H426 269 aaPredicted RBP10.47□□□□□ -0.73
COL28A1-206ENST00000465339 TAF9BQ9HBM6 251 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms