RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 OR4P4Q8NGL7 312 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 LGALS14Q8TCE9 139 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 ACOT12Q8WYK0 555 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 ARL11Q969Q4 196 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 AJUBAQ96IF1 538 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 ARHGAP5-AS1Q96IT6 56 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 CMTM3Q96MX0 182 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 FAAP24Q9BTP7 215 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 RNF167Q9H6Y7 350 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 ESM1Q9NQ30 184 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 ING3Q9NXR8 418 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 SCOCQ9UIL1 159 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 JPT1Q9UK76 154 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 SPATA2Q9UM82 520 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 LEUTXA8MZ59 168 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 TOR1AO14656 332 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 MMP23AO75900 390 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 GSTP1P09211 210 aaKnown RBP11.12□□□□□ -0.63
LIMD1-203ENST00000465039 RPS19P39019 145 aaKnown RBP11.12□□□□□ -0.63
LIMD1-203ENST00000465039 EFNB2P52799 333 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 TMBIM6P55061 237 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 LOXL3P58215 753 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 MRPS15P82914 257 aaKnown RBP11.12□□□□□ -0.63
LIMD1-203ENST00000465039 PITPNAQ00169 270 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 SLC9A3R2Q15599 337 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 LRRC75BQ2VPJ9 315 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 PLAC9Q5JTB6 97 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 CCDC144NLQ6NUI1 221 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 Q6ZS49 121 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 PDZD9Q8IXQ8 264 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 OR4K15Q8NH41 348 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 AP3S1Q92572 193 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 PHF21AQ96BD5 680 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 GALMQ96C23 342 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 PECRQ9BY49 303 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 ABCG5Q9H222 651 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 MMP28Q9H239 520 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 TAF9BQ9HBM6 251 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 ZNF286AQ9HBT8 521 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 GFOD1Q9NXC2 390 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 DPM3Q9P2X0 92 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 VPREB3Q9UKI3 123 aa11.12□□□□□ -0.63
LIMD1-203ENST00000465039 MEX3AA1L020 520 aaKnown RBP11.11□□□□□ -0.63
LIMD1-203ENST00000465039 SMIM30A4D0T7 59 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 J3QR06 171 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 SDCBPO00560 298 aaPredicted RBP11.11□□□□□ -0.63
LIMD1-203ENST00000465039 HOXA3O43365 443 aaPredicted RBP11.11□□□□□ -0.63
LIMD1-203ENST00000465039 RGS11O94810 467 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 HBZP02008 142 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 CLEC2LP0C7M8 214 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 RCC1P18754 421 aaPredicted RBP11.11□□□□□ -0.63
LIMD1-203ENST00000465039 OMGP23515 440 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 KIR2DS4P43632 304 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 DLX1P56177 255 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 NCS1P62166 190 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 MADCAM1Q13477 382 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 KIR2DS1Q14954 304 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 PNLIPRP3Q17RR3 467 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 GPR107Q5VW38 600 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 DTX3Q8N9I9 347 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 CMSS1Q9BQ75 279 aaKnown RBP11.11□□□□□ -0.63
LIMD1-203ENST00000465039 ATG5Q9H1Y0 275 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 GHITMQ9H3K2 345 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 CHMP1AQ9HD42 196 aaPredicted RBP11.11□□□□□ -0.63
LIMD1-203ENST00000465039 RAB18Q9NP72 206 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 AK3Q9UIJ7 227 aa11.11□□□□□ -0.63
LIMD1-203ENST00000465039 FBN1P35555 2871 aaKnown RBP11.11□□□□□ -0.63
LIMD1-203ENST00000465039 A0A0B4J203 849 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 MDFIC2A0A1B0GVS7 189 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 BUB1B-PAK6H3BSN5 160 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 ITGB1BP1O14713 200 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 CD3GP09693 182 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 SNRPBP14678 240 aaKnown RBP11.1□□□□□ -0.63
LIMD1-203ENST00000465039 DTYMKP23919 212 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 NFYBP25208 207 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 GDNFP39905 211 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 SERPINB10P48595 397 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 ZNF137PP52743 207 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 VBP1P61758 197 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 LSM3P62310 102 aaKnown RBP11.1□□□□□ -0.63
LIMD1-203ENST00000465039 KRTAP24-1Q3LI83 254 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 CCDC107Q8WV48 283 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 SLC25A38Q96DW6 304 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 OCSTAMPQ9BR26 566 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 DCSTAMPQ9H295 470 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 Q9N2K0 584 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 GNG12Q9UBI6 72 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 PITPNC1Q9UKF7 332 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 PSG11Q9UQ72 335 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 KCNK7Q9Y2U2 307 aa11.1□□□□□ -0.63
LIMD1-203ENST00000465039 LY6LH3BQJ8 138 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 TXNL1O43396 289 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 YPEL1O60688 119 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 NOL3O60936 208 aaKnown RBP11.09□□□□□ -0.63
LIMD1-203ENST00000465039 IL3RAP26951 378 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 BRS3P32247 399 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 RAB7AP51149 207 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms