RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 GPER1Q99527 375 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 TOLLIPQ9H0E2 274 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 ENOPH1Q9UHY7 261 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 A0A087WW49 117 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 ORC5O43913 435 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 HTR3BO95264 441 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 HLA-DRB1P01911 266 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 CSTBP04080 98 aaKnown RBP11.15□□□□□ -0.62
SMC1A-204ENST00000463684 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.62
SMC1A-204ENST00000463684 CALB2P22676 271 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 SATL1Q86VE3 508 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 ANKRD13BQ86YJ7 626 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 MINDY2Q8NBR6 621 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 OR10K1Q8NGX5 313 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 TNFAIP8L1Q8WVP5 186 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 FLYWCH2Q96CP2 140 aaKnown RBP11.15□□□□□ -0.62
SMC1A-204ENST00000463684 ZNF251Q9BRH9 671 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 THTPAQ9BU02 230 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 STUB1Q9UNE7 303 aa11.15□□□□□ -0.62
SMC1A-204ENST00000463684 DAPL1A0PJW8 107 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 ARPC1BO15143 372 aaKnown RBP11.14□□□□□ -0.63
SMC1A-204ENST00000463684 SLC31A2O15432 143 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 OR7C1O76099 320 aaPredicted RBP11.14□□□□□ -0.63
SMC1A-204ENST00000463684 HSPB1P04792 205 aaKnown RBP11.14□□□□□ -0.63
SMC1A-204ENST00000463684 RPSAP08865 295 aaKnown RBP11.14□□□□□ -0.63
SMC1A-204ENST00000463684 ARSBP15848 533 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 VHLP40337 213 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 ZNF137PP52743 207 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 LSAMPQ13449 338 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 FLOT2Q14254 428 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 HAGHQ16775 308 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 LPCAT4Q643R3 524 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 LIN54Q6MZP7 749 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 NEK7Q8TDX7 302 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 RSRP1Q9BUV0 290 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 FAM192AQ9GZU8 254 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 RAB9BQ9NP90 201 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 GNG12Q9UBI6 72 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 ST3GAL6Q9Y274 331 aa11.14□□□□□ -0.63
SMC1A-204ENST00000463684 IGHV7-81A0A0B4J1V7 117 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 A0A1W2PN81 502 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 OR4C45A6NMZ5 311 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 G3V2T6 193 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 J3QLW9 94 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 GABRPO00591 440 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 SLC16A6O15403 523 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 SPINT2O43291 252 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 LANCL1O43813 399 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 ZNF19P17023 458 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 BLVRBP30043 206 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-204ENST00000463684 CHRNA7P36544 502 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 ACTBP60709 375 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 ALKBH1Q13686 389 aaKnown RBP11.13□□□□□ -0.63
SMC1A-204ENST00000463684 CT45A1Q5HYN5 189 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 PARP16Q8N5Y8 322 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 OR8J1Q8NGP2 316 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 CT45A3Q8NHU0 189 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 ANKRD60Q9BZ19 345 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 CST11Q9H112 138 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 IFT22Q9H7X7 185 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 TPSG1Q9NRR2 321 aa11.13□□□□□ -0.63
SMC1A-204ENST00000463684 AIPO00170 330 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 NBR2O15453 112 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 IGLV1-51P01701 117 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 RAB3AP20336 220 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 ZNF134P52741 427 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 TMEM30BQ3MIR4 351 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 ATAD3CQ5T2N8 411 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 STEAP3Q658P3 488 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 KDM4DQ6B0I6 523 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 HAPLN4Q86UW8 402 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 STX19Q8N4C7 294 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 ZNF439Q8NDP4 499 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 OR10V1Q8NGI7 309 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 OR52N1Q8NH53 320 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 METTL9Q9H1A3 318 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 RIBC2Q9H4K1 309 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 ZNF581Q9P0T4 197 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 KIAA1456Q9P272 454 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 ING4Q9UNL4 249 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 DHDHQ9UQ10 334 aa11.12□□□□□ -0.63
SMC1A-204ENST00000463684 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
SMC1A-204ENST00000463684 TCRBV3S1A0A5B6 114 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 SLC25A17O43808 307 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 MT-ND4P03905 459 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 CNTFRP26992 372 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 CD40LGP29965 261 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 RBM11P57052 281 aaKnown RBP11.11□□□□□ -0.63
SMC1A-204ENST00000463684 TMEM267Q0VDI3 215 aaPredicted RBP11.11□□□□□ -0.63
SMC1A-204ENST00000463684 C5orf64Q2M2E5 130 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 PYHIN1Q6K0P9 492 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 ASCL4Q6XD76 172 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 ZNF497Q6ZNH5 498 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 LINC00596Q86U02 117 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 ZDHHC13Q8IUH4 622 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 PRR18Q8N4B5 295 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 TCTEX1D1Q8N7M0 179 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms