RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 S100PBPQ96BU1 408 aa8.39□□□□□ -1.07
PTPRD-207ENST00000463477 BOD1Q96IK1 185 aa8.39□□□□□ -1.07
PTPRD-207ENST00000463477 MTCH1Q9NZJ7 389 aa8.39□□□□□ -1.07
PTPRD-207ENST00000463477 AMDHD2Q9Y303 409 aa8.39□□□□□ -1.07
PTPRD-207ENST00000463477 SIAH2O43255 324 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 KCNAB3O43448 404 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 HOXB1P14653 301 aaPredicted RBP8.38□□□□□ -1.07
PTPRD-207ENST00000463477 CCNOP22674 350 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 WNT5AP41221 380 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 P2RY1P47900 373 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 BLOC1S1P78537 153 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 ZNF273Q14593 569 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 MST1LQ2TV78 715 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 TIMM23BQ5SRD1 257 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 C9orf135Q5VTT2 229 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 FBXW12Q6X9E4 464 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 BHLHA15Q7RTS1 189 aaPredicted RBP8.38□□□□□ -1.07
PTPRD-207ENST00000463477 TMED6Q8WW62 240 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 SLAMF9Q96A28 289 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 TMEM56Q96MV1 263 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 TMEM222Q9H0R3 208 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 PLEKHF2Q9H8W4 249 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 TAF9BQ9HBM6 251 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 POMT1Q9Y6A1 747 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 ATP23Q9Y6H3 246 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 TMEM56-RWDD3S4R434 201 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 MYO9AB2RTY4 2548 aa8.38□□□□□ -1.07
PTPRD-207ENST00000463477 TMEM218A2RU14 115 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 TRDCB7Z8K6 153 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 MPPED1O15442 326 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 GPR137BO60478 399 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 LYZL6O75951 148 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 NGFP01138 241 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 MBPP02686 304 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-207ENST00000463477 TK1P04183 234 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 FXYD4P59646 89 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 TGFBR3Q03167 851 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 PJVKQ0ZLH3 352 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 TSC22D1Q15714 1073 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 SHEQ5VZ18 495 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 BRICD5Q6PL45 260 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 Q8IYB0 196 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 SPERTQ8NA61 448 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 OR4D5Q8NGN0 318 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 IL22RA2Q969J5 263 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 SPIN2AQ99865 258 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 SPIN2BQ9BPZ2 258 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 NGBQ9NPG2 151 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 PARP11Q9NR21 331 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 TREM2Q9NZC2 230 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 CARHSP1Q9Y2V2 147 aaKnown RBP8.37□□□□□ -1.07
PTPRD-207ENST00000463477 ANKRD17O75179 2603 aaKnown RBP8.37□□□□□ -1.07
PTPRD-207ENST00000463477 C3orf85A0A1B0GTC6 90 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 OR5H1A6NKK0 313 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 NPIPB11E5RHQ5 1161 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 J3QT63 122 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 GPR31O00270 319 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 ST8SIA3O43173 380 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 ATG12O94817 140 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 APOC3P02656 99 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 ACAA1P09110 424 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-207ENST00000463477 CCL2P13500 99 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 LOXP28300 417 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-207ENST00000463477 GNRHRP30968 328 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 BTN1A1Q13410 526 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 GABRA6Q16445 453 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 TBC1D28Q2M2D7 210 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 PHLDA2Q53GA4 152 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 FAM76BQ5HYJ3 339 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 RPL7L1Q6DKI1 246 aaKnown RBP8.37□□□□□ -1.07
PTPRD-207ENST00000463477 MOB1BQ7L9L4 216 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 LYZL2Q7Z4W2 148 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 SPAG16Q8N0X2 631 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 OR4A4PQ8NGN8 299 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 LYPD6BQ8NI32 183 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 MUCL1Q96DR8 90 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 OR51I2Q9H344 312 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 C11orf1Q9H5F2 150 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 FBXL17Q9UF56 701 aa8.37□□□□□ -1.07
PTPRD-207ENST00000463477 HRNRQ86YZ3 2850 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-207ENST00000463477 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-207ENST00000463477 A0A1W2PPR1 153 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 ZNF705EA8MWA4 302 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-207ENST00000463477 PHF1O43189 567 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-207ENST00000463477 SEC11BP0C7V7 166 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 MMP9P14780 707 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 ZNF14P17017 642 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-207ENST00000463477 UCP1P25874 307 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 MDH2P40926 338 aaKnown RBP8.36□□□□□ -1.07
PTPRD-207ENST00000463477 CAV2P51636 162 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 TMEM33P57088 247 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 SP6Q3SY56 376 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 HIKESHIQ53FT3 197 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 IGSF11Q5DX21 431 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 MDP1Q86V88 176 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 WFDC8Q8IUA0 241 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 FAM58AQ8N1B3 248 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 SVBPQ8N300 66 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 C17orf78Q8N4C9 275 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 COMMD1Q8N668 190 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms